SHOGoiN Cell Methylome: GSM1370562

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370562


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9060100-715Sequence Read ArchiveSRP041257SRP041257_M32Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 4.9069 0.0000
2 ENSMUSG00000040370 Etfrf1 electron transfer flavoprotein regulatory factor 1 4.3923 0.0000
3 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 3.5850 0.0011
4 ENSMUSG00000102267 9530003O04Rik RIKEN cDNA 9530003O04 gene 3.3219 0.0042
5 ENSMUSG00000110940 NA 3.0000 0.0162
6 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.6962 0.0000
7 ENSMUSG00000043384 Gprasp1 G protein-coupled receptor associated sorting protein 1 2.6427 0.0001
8 ENSMUSG00000072964 Bhlhb9 basic helix-loop-helix domain containing, class B9 2.6427 0.0001
9 ENSMUSG00000036036 Zfp57 zinc finger protein 57 2.5850 0.0636
10 ENSMUSG00000104509 Gm33994 predicted gene, 33994 2.5850 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000099494 Gm28197 predicted gene 28197 -3.0000 0.0058
51075 ENSMUSG00000095869 Ppp1r2-ps6 protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 6 -3.0000 0.0058
51074 ENSMUSG00000084740 Gm25294 predicted gene, 25294 -3.0000 0.0058
51073 ENSMUSG00000077010 Gm22189 predicted gene, 22189 -3.0000 0.0058
51072 ENSMUSG00000101465 Gm29190 predicted gene 29190 -2.9069 0.0003
51071 ENSMUSG00000101111 Gm28437 predicted gene 28437 -2.8406 0.0000
51070 ENSMUSG00000100369 Gm29527 predicted gene 29527 -2.8219 0.0000
51069 ENSMUSG00000111210 NA -2.8074 0.0120
51068 ENSMUSG00000100809 Gm28612 predicted gene 28612 -2.8074 0.0120
51067 ENSMUSG00000100227 Gm28291 predicted gene 28291 -2.8074 0.0120

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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