SHOGoiN Cell Methylome: GSM1370563

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370563


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M33Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 2.8074 0.0046
2 ENSMUSG00000040254 Sema3d Semaphorin-3D 2.7233 0.0000
3 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 2.5850 0.0112
4 ENSMUSG00000083425 Gm13992 predicted gene 13992 2.5850 0.0112
5 ENSMUSG00000088596 Gm24602 predicted gene, 24602 2.5850 0.0001
6 ENSMUSG00000032766 Gng11 guanine nucleotide binding protein (G protein), gamma 11 2.3219 0.0275
7 ENSMUSG00000094356 Igkv8-28 NA 2.3219 0.0275
8 ENSMUSG00000102167 Gm2345 predicted gene 2345 2.3219 0.0000
9 ENSMUSG00000103465 Gm37617 predicted gene, 37617 2.3219 0.0275
10 ENSMUSG00000106742 Gm42474 predicted gene 42474 2.3219 0.0275

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000021886 Gpr65 G protein-coupled receptor 65 -1.9812 0.0000
50997 ENSMUSG00000104078 Gm37023 predicted gene, 37023 -1.9690 0.0023
50996 ENSMUSG00000096458 Moap1 Modulator of apoptosis 1 -1.9541 0.0000
50995 ENSMUSG00000036398 Ppp1r11 protein phosphatase 1, regulatory (inhibitor) subunit 11 -1.9111 0.0000
50994 ENSMUSG00000103051 Gm7871 predicted gene 7871 -1.9037 0.0561
50993 ENSMUSG00000101249 Gm29216 predicted gene 29216 -1.8719 0.0000
50992 ENSMUSG00000100862 Gm10925 predicted gene 10925 -1.8626 0.0000
50991 ENSMUSG00000101111 Gm28437 predicted gene 28437 -1.8538 0.0000
50990 ENSMUSG00000111980 Gm20304 predicted gene, 20304 -1.8412 0.0000
50989 ENSMUSG00000073676 Hspe1 heat shock protein 1 (chaperonin 10) -1.8401 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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