SHOGoiN Cell Methylome: GSM1370565

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370565


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9060100-715Sequence Read ArchiveSRP041257SRP041257_M35Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.8580 0.0000
2 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 3.8074 0.0002
3 ENSMUSG00000098114 Gm26957 predicted gene, 26957 3.5850 0.0010
4 ENSMUSG00000015405 Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 3.0000 0.0156
5 ENSMUSG00000103125 Gm37388 predicted gene, 37388 3.0000 0.0156
6 ENSMUSG00000104318 Pcdha7 protocadherin alpha 7 3.0000 0.0156
7 ENSMUSG00000040254 Sema3d sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 2.8074 0.0005
8 ENSMUSG00000040370 Etfrf1 electron transfer flavoprotein regulatory factor 1 2.7618 0.0000
9 ENSMUSG00000078932 CN725425 cDNA sequence CN725425 2.6610 0.0001
10 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.6591 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000098178 Gm42418 predicted gene, 42418 -3.3510 0.0000
51075 ENSMUSG00000100884 Gm28281 predicted gene 28281 -3.3362 0.0000
51074 ENSMUSG00000103347 Gm37734 predicted gene, 37734 -3.3219 0.0000
51073 ENSMUSG00000102016 Gm29606 predicted gene 29606 -3.3219 0.0019
51072 ENSMUSG00000101804 Gm28813 predicted gene 28813 -3.3219 0.0019
51071 ENSMUSG00000101440 Gm29425 predicted gene 29425 -3.3219 0.0019
51070 ENSMUSG00000101422 Gm29301 predicted gene 29301 -3.3219 0.0019
51069 ENSMUSG00000100805 Gm29108 predicted gene 29108 -3.3219 0.0019
51068 ENSMUSG00000100126 Gm29584 predicted gene 29584 -3.3219 0.0019
51067 ENSMUSG00000075113 Olfr1209 olfactory receptor 1209 -3.3219 0.0019

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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