SHOGoiN Cell Methylome: GSM1370566

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370566


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9060100-715Sequence Read ArchiveSRP041257SRP041257_M36Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 4.8074 0.0000
2 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.8074 0.0000
3 ENSMUSG00000109539 Gm44667 predicted gene 44667 4.6439 0.0000
4 ENSMUSG00000112452 NA 4.6439 0.0000
5 ENSMUSG00000020191 4930415F15Rik RIKEN cDNA 4930415F15 gene 4.3923 0.0000
6 ENSMUSG00000072964 Bhlhb9 basic helix-loop-helix domain containing, class B9 4.1699 0.0000
7 ENSMUSG00000015405 Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 3.3219 0.0019
8 ENSMUSG00000098299 Mir7224 microRNA 7224 3.3219 0.0019
9 ENSMUSG00000102569 Gm37041 predicted gene, 37041 3.1699 0.0000
10 ENSMUSG00000055782 Abcd2 ATP-binding cassette, sub-family D (ALD), member 2 3.1427 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000099416 Gm28540 predicted gene 28540 -3.4594 0.0020
51075 ENSMUSG00000084740 Gm25294 predicted gene, 25294 -3.4594 0.0020
51074 ENSMUSG00000082638 Gm12815 predicted gene 12815 -3.4594 0.0020
51073 ENSMUSG00000102016 Gm29606 predicted gene 29606 -3.3219 0.0039
51072 ENSMUSG00000101190 Gm28274 predicted gene 28274 -3.3219 0.0039
51071 ENSMUSG00000100544 Gm28606 predicted gene 28606 -3.3219 0.0039
51070 ENSMUSG00000100440 Gm28405 predicted gene 28405 -3.3219 0.0000
51069 ENSMUSG00000099554 Gm28259 predicted gene 28259 -3.3219 0.0039
51068 ENSMUSG00000082248 Gm13161 predicted gene 13161 -3.3219 0.0039
51067 ENSMUSG00000075379 Olfr358 olfactory receptor 358 -3.3219 0.0039

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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