SHOGoiN Cell Methylome: GSM1370566

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370566


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M36Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 NA 4.8074 0.0000
2 ENSMUSG00000109354 Olfr706 NA 4.8074 0.0000
3 ENSMUSG00000109539 Gm44667 predicted gene 44667 4.6439 0.0000
4 ENSMUSG00000112452 Gm48075 predicted gene, 48075 4.6439 0.0000
5 ENSMUSG00000020191 Spata48 Spermatosis-associated protein 48 4.3923 0.0000
6 ENSMUSG00000072964 Bhlhb9 Protein BHLHb9 4.1699 0.0000
7 ENSMUSG00000015405 Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 3.3219 0.0019
8 ENSMUSG00000098299 Mir7224 microRNA 7224 3.3219 0.0019
9 ENSMUSG00000102569 Gm37041 predicted gene, 37041 3.1699 0.0000
10 ENSMUSG00000055782 Abcd2 ATP-binding cassette, sub-family D (ALD), member 2 3.1427 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000080886 Gm14847 predicted gene 14847 -2.4594 0.0117
50997 ENSMUSG00000073878 Gm13304 predicted gene 13304 -2.4594 0.0117
50996 ENSMUSG00000082935 Gm7658 predicted gene 7658 -2.4534 0.0001
50995 ENSMUSG00000081803 Gm15282 predicted gene 15282 -2.4037 0.0039
50994 ENSMUSG00000100884 Gm28281 predicted gene 28281 -2.3907 0.0010
50993 ENSMUSG00000100515 Gm17916 predicted gene, 17916 -2.3774 0.0020
50992 ENSMUSG00000105610 Gm47313 predicted gene, 47313 -2.3343 0.0000
50991 ENSMUSG00000093769 Hist2h3c1 Histone H3.2 -2.3343 0.0000
50990 ENSMUSG00000093553 Gm20633 predicted gene 20633 -2.3343 0.0000
50989 ENSMUSG00000070392 Gm20634 predicted gene 20634 -2.3343 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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