SHOGoiN Cell Methylome: GSM1370569

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370569


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9060100-715Sequence Read ArchiveSRP041257SRP041257_M39Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 6.2668 0.0000
2 ENSMUSG00000101242 Gm28319 predicted gene 28319 4.5850 0.0000
3 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.3219 0.0000
4 ENSMUSG00000084441 Gm26255 predicted gene, 26255 3.7004 0.0000
5 ENSMUSG00000101818 Gm28269 predicted gene 28269 3.5850 0.0001
6 ENSMUSG00000104152 Ighv10-4 immunoglobulin heavy variable V10-4 3.3219 0.0005
7 ENSMUSG00000108303 Gm39075 predicted gene, 39075 3.1699 0.0013
8 ENSMUSG00000112613 NA 3.1699 0.0013
9 ENSMUSG00000093385 A330044P14Rik RIKEN cDNA A330044P14 gene 3.0000 0.0029
10 ENSMUSG00000108262 Gm43867 predicted gene, 43867 3.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000100140 Gm28789 predicted gene 28789 -2.8074 0.0396
51075 ENSMUSG00000098011 Gm21232 predicted gene, 21232 -2.8074 0.0396
51074 ENSMUSG00000092056 Gm7289 predicted gene 7289 -2.8074 0.0396
51073 ENSMUSG00000084740 Gm25294 predicted gene, 25294 -2.8074 0.0396
51072 ENSMUSG00000031204 Asb12 ankyrin repeat and SOCS box-containing 12 -2.8074 0.0396
51071 ENSMUSG00000103936 Gm36965 predicted gene, 36965 -2.5850 0.0735
51070 ENSMUSG00000103681 Gm37130 predicted gene, 37130 -2.5850 0.0735
51069 ENSMUSG00000101961 Gm28220 predicted gene 28220 -2.5850 0.0735
51068 ENSMUSG00000101190 Gm28274 predicted gene 28274 -2.5850 0.0735
51067 ENSMUSG00000100988 Gm28136 predicted gene 28136 -2.5850 0.0735

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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