SHOGoiN Cell Methylome: GSM1370569

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370569


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M39Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 NA 6.2668 0.0000
2 ENSMUSG00000101242 Gm28319 predicted gene 28319 4.5850 0.0000
3 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.3219 0.0000
4 ENSMUSG00000084441 Gm26255 predicted gene, 26255 3.7004 0.0000
5 ENSMUSG00000101818 Gm28269 NA 3.5850 0.0001
6 ENSMUSG00000104152 Ighv10-4 immunoglobulin heavy variable V10-4 3.3219 0.0005
7 ENSMUSG00000108303 Gm39075 predicted gene, 39075 3.1699 0.0013
8 ENSMUSG00000112613 Gm48175 predicted gene, 48175 3.1699 0.0013
9 ENSMUSG00000093385 A330044P14Rik RIKEN cDNA A330044P14 gene 3.0000 0.0029
10 ENSMUSG00000108262 Gm43867 predicted gene, 43867 3.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000080997 Gm11885 predicted gene 11885 -2.0000 0.2631
50997 ENSMUSG00000073878 Gm13304 predicted gene 13304 -2.0000 0.2631
50996 ENSMUSG00000070552 Mrgprx1 Mas-related G-protein coupled receptor member X1 -2.0000 0.0035
50995 ENSMUSG00000062410 Hsd3b3 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 -2.0000 0.2631
50994 ENSMUSG00000045689 Pcdhb4 NA -2.0000 0.2631
50993 ENSMUSG00000044708 Kcnj10 ATP-sensitive inward rectifier potassium channel 10 -2.0000 0.2631
50992 ENSMUSG00000021772 Nkiras1 NF-kappa-B inhibitor-interacting Ras-like protein 1 -2.0000 0.0396
50991 ENSMUSG00000021692 Dimt1 Probable dimethyladenosine transferase -2.0000 0.0000
50990 ENSMUSG00000020311 Erlec1 Endoplasmic reticulum lectin 1 -2.0000 0.0000
50989 ENSMUSG00000012405 Rpl15 ribosomal protein L15 -2.0000 0.0396

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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