SHOGoiN Cell Methylome: GSM1370571

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370571


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M41Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109354 Olfr706 olfactory receptor 706 5.5749 0.0000
2 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 4.7004 0.0000
3 ENSMUSG00000101818 Gm28269 predicted gene 28269 4.3219 0.0000
4 ENSMUSG00000107194 Gm43173 predicted gene 43173 4.1699 0.0000
5 ENSMUSG00000107374 Gm43172 predicted gene 43172 4.1699 0.0000
6 ENSMUSG00000084441 Gm26255 predicted gene, 26255 4.0000 0.0001
7 ENSMUSG00000020226 Slc5a4b solute carrier family 5 (neutral amino acid transporters, system A), member 4b 3.5850 0.0011
8 ENSMUSG00000086540 Scml1 Vsex comb on midleg-like 1 (Drosophila) 3.4594 0.0022
9 ENSMUSG00000061809 Tbpl2 TATA box binding protein like 2 3.3219 0.0043
10 ENSMUSG00000090449 Gm17076 predicted gene 17076 3.3219 0.0043

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000101508 Gm28832 predicted gene 28832 -2.5850 0.0241
51075 ENSMUSG00000101119 Gm29060 predicted gene 29060 -2.5850 0.0241
51074 ENSMUSG00000100915 Gm29321 predicted gene 29321 -2.5850 0.0241
51073 ENSMUSG00000100388 Gm29116 predicted gene 29116 -2.5850 0.0241
51072 ENSMUSG00000100248 Gm28950 predicted gene 28950 -2.5850 0.0241
51071 ENSMUSG00000099916 Gm28318 predicted gene 28318 -2.5850 0.0241
51070 ENSMUSG00000099643 Gm29162 predicted gene 29162 -2.5850 0.0241
51069 ENSMUSG00000099520 Gm29061 predicted gene 29061 -2.5850 0.0241
51068 ENSMUSG00000094380 Olfr904 olfactory receptor 904 -2.5850 0.0241
51067 ENSMUSG00000073878 Gm13304 predicted gene 13304 -2.5850 0.0241

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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