SHOGoiN Cell Methylome: GSM1370572

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370572


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M42Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 5.9887 0.0000
2 ENSMUSG00000109539 Gm44667 predicted gene 44667 5.7549 0.0000
3 ENSMUSG00000047419 Cmya5 cardiomyopathy associated 5 4.5850 0.0000
4 ENSMUSG00000102569 Gm37041 predicted gene, 37041 4.0875 0.0000
5 ENSMUSG00000109354 Olfr706 olfactory receptor 706 3.7868 0.0000
6 ENSMUSG00000075137 Olfr1163 olfactory receptor 1163 3.5850 0.0003
7 ENSMUSG00000089678 Agxt2 alanine-glyoxylate aminotransferase 2 3.5850 0.0003
8 ENSMUSG00000103465 Gm37617 predicted gene, 37617 3.3219 0.0014
9 ENSMUSG00000110158 Gm45690 predicted gene 45690 3.3219 0.0014
10 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 3.1699 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000100544 Gm28606 predicted gene 28606 -2.5850 0.0632
51075 ENSMUSG00000100532 Gm28225 predicted gene 28225 -2.5850 0.0632
51074 ENSMUSG00000100054 Gm28202 predicted gene 28202 -2.5850 0.0632
51073 ENSMUSG00000099355 Gm29342 predicted gene 29342 -2.5850 0.0632
51072 ENSMUSG00000075113 Olfr1209 olfactory receptor 1209 -2.5850 0.0632
51071 ENSMUSG00000073878 Gm13304 predicted gene 13304 -2.5850 0.0632
51070 ENSMUSG00000100805 Gm29108 predicted gene 29108 -2.4594 0.0122
51069 ENSMUSG00000101542 Gm29303 predicted gene 29303 -2.4534 0.0001
51068 ENSMUSG00000101939 Gm28438 predicted gene 28438 -2.4143 0.0000
51067 ENSMUSG00000067736 Gm10222 predicted gene 10222 -2.3824 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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