SHOGoiN Cell Methylome: GSM1370573

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370573


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9060100-715Sequence Read ArchiveSRP041257SRP041257_M43Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109539 Gm44667 predicted gene 44667 6.5546 0.0000
2 ENSMUSG00000081531 Vmn1r-ps113 vomeronasal 1 receptor, pseudogene 113 5.2095 0.0000
3 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 5.2095 0.0000
4 ENSMUSG00000101818 Gm28269 predicted gene 28269 4.5850 0.0000
5 ENSMUSG00000102569 Gm37041 predicted gene, 37041 4.4085 0.0000
6 ENSMUSG00000099582 Gm29014 predicted gene 29014 3.7004 0.0000
7 ENSMUSG00000076481 Trbv30 T cell receptor beta, variable 30 3.3219 0.0005
8 ENSMUSG00000101242 Gm28319 predicted gene 28319 3.2696 0.0000
9 ENSMUSG00000105290 Gm43528 predicted gene 43528 3.0646 0.0000
10 ENSMUSG00000043865 Tas2r118 taste receptor, type 2, member 118 3.0000 0.0025

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000100452 Gm29628 predicted gene 29628 -2.8074 0.0420
51075 ENSMUSG00000100227 Gm28291 predicted gene 28291 -2.8074 0.0420
51074 ENSMUSG00000099896 Gm29278 predicted gene 29278 -2.8074 0.0061
51073 ENSMUSG00000099341 Gm29090 predicted gene 29090 -2.8074 0.0420
51072 ENSMUSG00000094911 Gm21921 predicted gene, 21921 -2.8074 0.0420
51071 ENSMUSG00000081567 Gm14838 predicted gene 14838 -2.8074 0.0420
51070 ENSMUSG00000073966 Olfr561 olfactory receptor 561 -2.8074 0.0420
51069 ENSMUSG00000066239 Olfr519 olfactory receptor 519 -2.8074 0.0420
51068 ENSMUSG00000104577 Gm6641 predicted gene 6641 -2.7297 0.0010
51067 ENSMUSG00000082968 Gm14581 predicted gene 14581 -2.7004 0.0103

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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