SHOGoiN Cell Methylome: GSM1413827

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1413827


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M45Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS, deeper sequencing)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000103382 Gm37755 predicted gene, 37755 3.5090 0.0000
2 ENSMUSG00000073916 Olfr669 olfactory receptor family 52 subfamily N member 5 3.1699 0.0000
3 ENSMUSG00000075119 Olfr1197 NA 3.1699 0.0000
4 ENSMUSG00000081487 Gm13689 predicted gene 13689 3.1699 0.0000
5 ENSMUSG00000088157 Gm26351 predicted gene, 26351 3.1699 0.0000
6 ENSMUSG00000103377 Gm37180 predicted gene, 37180 3.1699 0.0000
7 ENSMUSG00000089563 Gm24667 predicted gene, 24667 3.0850 0.0000
8 ENSMUSG00000100672 Gm28404 predicted gene 28404 3.0850 0.0000
9 ENSMUSG00000063656 Gm10135 NA 3.0112 0.0000
10 ENSMUSG00000088268 Gm24776 predicted gene, 24776 3.0112 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000092304 Gm20530 predicted gene 20530 -2.7015 0.0001
50997 ENSMUSG00000032375 Aph1b Gamma-secretase subunit APH-1B -2.7004 0.0000
50996 ENSMUSG00000039126 Prune2 2 -2.7001 0.0000
50995 ENSMUSG00000024603 Dctn4 Mus musculus dynactin 4 (Dctn4), transcript variant 2, mRNA. -2.6991 0.0000
50994 ENSMUSG00000079509 Zfx zinc finger protein X-linked -2.6989 0.0000
50993 ENSMUSG00000105746 Gm43595 predicted gene 43595 -2.6984 0.0000
50992 ENSMUSG00000055125 M5C1000I18Rik RIKEN cDNA M5C1000I18 gene -2.6979 0.0000
50991 ENSMUSG00000099940 Gm29265 predicted gene 29265 -2.6962 0.3836
50990 ENSMUSG00000061578 Ksr2 kinase suppressor of ras 2 -2.6932 0.0000
50989 ENSMUSG00000084493 Gm22106 predicted gene, 22106 -2.6922 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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