SHOGoiN Cell Methylome: GSM1413827

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1413827


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M45Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS, deeper sequencing)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000103382 Gm37755 predicted gene, 37755 3.5090 0.0000
2 ENSMUSG00000073916 Olfr669 olfactory receptor 669 3.1699 0.0000
3 ENSMUSG00000075119 Olfr1197 olfactory receptor 1197 3.1699 0.0000
4 ENSMUSG00000081487 Gm13689 predicted gene 13689 3.1699 0.0000
5 ENSMUSG00000088157 Gm26351 predicted gene, 26351 3.1699 0.0000
6 ENSMUSG00000103377 Gm37180 predicted gene, 37180 3.1699 0.0000
7 ENSMUSG00000089563 Gm24667 predicted gene, 24667 3.0850 0.0000
8 ENSMUSG00000100672 Gm28404 predicted gene 28404 3.0850 0.0000
9 ENSMUSG00000063656 Gm10135 predicted gene 10135 3.0112 0.0000
10 ENSMUSG00000088268 Gm24776 predicted gene, 24776 3.0112 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
51076 ENSMUSG00000105696 Gm19211 predicted gene, 19211 -2.9386 0.5654
51075 ENSMUSG00000111892 NA -2.9367 0.0000
51074 ENSMUSG00000055976 Cldn23 claudin 23 -2.9226 0.0000
51073 ENSMUSG00000109597 Gm45492 predicted gene 45492 -2.9128 0.0000
51072 ENSMUSG00000100954 Gm10138 predicted gene 10138 -2.9080 0.0000
51071 ENSMUSG00000105392 Gm42684 predicted gene 42684 -2.8915 0.0000
51070 ENSMUSG00000097924 A730020E08Rik RIKEN cDNA A730020E08 gene -2.8846 0.0000
51069 ENSMUSG00000097230 Gm26853 predicted gene, 26853 -2.8826 0.0000
51068 ENSMUSG00000090317 Gm17324 predicted gene, 17324 -2.8779 0.0000
51067 ENSMUSG00000047889 Serpinb6d serine (or cysteine) peptidase inhibitor, clade B, member 6d -2.8774 0.0001

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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