SHOGoiN Cell Methylome: GSM1413828

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1413828


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M46Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS, deeper sequencing)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000073448 Gm10509 NA 3.1699 0.0000
2 ENSMUSG00000107683 Gm44139 predicted gene, 44139 3.1699 0.0000
3 ENSMUSG00000108250 Tas2r111-ps2 taste receptor, type 2, member 111, pseudogene 2 3.1699 0.0000
4 ENSMUSG00000092199 Gm18358 predicted gene, 18358 2.8906 0.0000
5 ENSMUSG00000079271 1700049E17Rik1 RIKEN cDNA 1700049E17 gene, gene 1 2.8219 0.0000
6 ENSMUSG00000076958 Gm24935 predicted gene, 24935 2.8074 0.0000
7 ENSMUSG00000079521 Gm5938 NA 2.8074 0.0000
8 ENSMUSG00000097966 Gm9423 predicted gene 9423 2.8074 0.0000
9 ENSMUSG00000108164 Gm43899 predicted gene, 43899 2.8074 0.0000
10 ENSMUSG00000108544 Cyp2b26-ps cytochrome P450, family 2, subfamily b, polypeptide 26, pseudogene 2.8074 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000020580 Rock2 Rho associated coiled-coil containing protein kinase 2 -2.3872 0.0000
50997 ENSMUSG00000098120 Gm5914 predicted gene 5914 -2.3861 0.0000
50996 ENSMUSG00000040693 Slco4c1 Solute carrier organic anion transporter family member 4C1 -2.3854 0.0000
50995 ENSMUSG00000043668 Tox3 TOX high mobility group box family member 3 -2.3838 0.0000
50994 ENSMUSG00000100253 1700020N18Rik RIKEN cDNA 1700020N18 gene -2.3822 0.0000
50993 ENSMUSG00000084950 Gm5577 NA -2.3794 0.0000
50992 ENSMUSG00000050478 Olfr807 NA -2.3791 0.0000
50991 ENSMUSG00000093279 Gm26238 predicted gene, 26238 -2.3755 0.0000
50990 ENSMUSG00000106927 Gm43598 predicted gene 43598 -2.3729 0.0000
50989 ENSMUSG00000107798 Gm44064 predicted gene, 44064 -2.3721 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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