SHOGoiN Cell Methylome: GSM1849305

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849305


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5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M1Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000227279 NA 5.7814 0.0000
2 ENSG00000201826 RNU6-867P RNA, U6 small nuclear 867, pseudogene 5.6724 0.0000
3 ENSG00000251958 RNU6-1102P RNA, U6 small nuclear 1102, pseudogene 5.6147 0.0000
4 ENSG00000271130 IGHV3OR16-8 immunoglobulin heavy variable 3/OR16-8 (non-functional) 5.3576 0.0000
5 ENSG00000202428 RNU6-108P RNA, U6 small nuclear 108, pseudogene 5.2990 0.0000
6 ENSG00000273951 NA 5.2854 0.0000
7 ENSG00000264693 NA 5.1213 0.0000
8 ENSG00000251986 NA 5.1142 0.0000
9 ENSG00000248308 NA 5.0444 0.0000
10 ENSG00000201573 NA 5.0443 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000254102 NA -3.2592 0.0000
63646 ENSG00000226645 NA -3.2526 0.0000
63645 ENSG00000214745 NA -3.2525 0.0000
63644 ENSG00000212158 SNORD66 small nucleolar RNA, C/D box 66 -3.2512 0.0000
63643 ENSG00000277295 RN7SL489P RNA, 7SL, cytoplasmic 489, pseudogene -3.2509 0.0000
63642 ENSG00000232787 OR7L1P olfactory receptor family 7 subfamily L member 1 pseudogene -3.2494 0.0000
63641 ENSG00000255483 NA -3.2459 0.0567
63640 ENSG00000259112 NDUFC2-KCTD14 NDUFC2-KCTD14 readthrough -3.2341 0.0000
63639 ENSG00000274718 NA -3.2334 0.0000
63638 ENSG00000087088 BAX BCL2 associated X, apoptosis regulator -3.2331 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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