SHOGoiN Cell Methylome: GSM1849305

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849305


Profile download
5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M1Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000227279 NA 5.7814 0.0000
2 ENSG00000201826 RNU6-867P RNA, U6 small nuclear 867, pseudogene 5.6724 0.0000
3 ENSG00000251958 RNU6-1102P RNA, U6 small nuclear 1102, pseudogene 5.6147 0.0000
4 ENSG00000271130 IGHV3OR16-8 immunoglobulin heavy variable 3/OR16-8 (non-functional) 5.3576 0.0000
5 ENSG00000202428 RNU6-108P RNA, U6 small nuclear 108, pseudogene 5.2990 0.0000
6 ENSG00000273951 NA 5.2854 0.0000
7 ENSG00000264693 NA 5.1213 0.0000
8 ENSG00000251986 Y RNA 5.1142 0.0000
9 ENSG00000248308 NA 5.0444 0.0000
10 ENSG00000201573 Y RNA 5.0443 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000173285 OR10K1 olfactory receptor family 10 subfamily K member 1 -4.0000 0.0911
63818 ENSG00000131484 NA -4.0000 0.0911
63817 ENSG00000237294 EIF4BP9 eukaryotic translation initiation factor 4B pseudogene 9 -3.9993 0.0000
63816 ENSG00000258785 LINC01580 long intergenic non-protein coding RNA 1580 -3.9886 0.0009
63815 ENSG00000257046 NA -3.9814 0.0000
63814 ENSG00000254097 IGKV3D-25 immunoglobulin kappa variable 3D-25 (pseudogene) -3.9690 0.0002
63813 ENSG00000215120 NA -3.9690 0.0002
63812 ENSG00000257853 MED15P1 mediator complex subunit 15 pseudogene 1 -3.9542 0.0002
63811 ENSG00000244242 IFITM10 interferon induced transmembrane protein 10 -3.9390 0.0000
63810 ENSG00000249338 HMGB1P47 high mobility group box 1 pseudogene 47 -3.9387 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...