SHOGoiN Cell Methylome: GSM1849306

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849306


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5030203000000000000000-761Sequence Read ArchiveSRP062328SRP062328_M2Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000260405 NA 5.2854 0.0000
2 ENSG00000260675 NA 5.2854 0.0000
3 ENSG00000205129 C4orf47 chromosome 4 open reading frame 47 4.7004 0.0000
4 ENSG00000223676 RPL34P26 ribosomal protein L34 pseudogene 26 4.7004 0.0000
5 ENSG00000250711 PRELID3BP7 PRELI domain containing 3B pseudogene 7 4.7004 0.0000
6 ENSG00000280283 NA 4.6251 0.0000
7 ENSG00000252184 RNU2-10P RNA, U2 small nuclear 10, pseudogene 4.6144 0.0000
8 ENSG00000267070 NA 4.5236 0.0000
9 ENSG00000273623 TP53 target 1 conserved region 1 4.5236 0.0000
10 ENSG00000152433 ZNF547 zinc finger protein 547 4.4594 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000280220 NA -3.9069 0.6184
63818 ENSG00000276627 NA -3.9069 0.6184
63817 ENSG00000276073 NA -3.9069 0.6184
63816 ENSG00000275787 OR7G15P olfactory receptor family 7 subfamily G member 15 pseudogene -3.9069 0.6184
63815 ENSG00000275784 NA -3.9069 0.6184
63814 ENSG00000270071 NA -3.9069 0.6184
63813 ENSG00000269615 MTDHP2 metadherin pseudogene 2 -3.9069 0.2618
63812 ENSG00000265889 Y RNA -3.9069 0.0094
63811 ENSG00000264388 NA -3.9069 0.2618
63810 ENSG00000262681 NA -3.9069 0.6184

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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