SHOGoiN Cell Methylome: GSM1849306

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849306


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5030203000000000000000-761Sequence Read ArchiveSRP062328SRP062328_M2Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000260405 NA 5.2854 0.0000
2 ENSG00000260675 NA 5.2854 0.0000
3 ENSG00000205129 C4orf47 chromosome 4 open reading frame 47 4.7004 0.0000
4 ENSG00000223676 RPL34P26 ribosomal protein L34 pseudogene 26 4.7004 0.0000
5 ENSG00000250711 PRELID3BP7 PRELI domain containing 3B pseudogene 7 4.7004 0.0000
6 ENSG00000280283 NA 4.6251 0.0000
7 ENSG00000252184 RNU2-10P RNA, U2 small nuclear 10, pseudogene 4.6144 0.0000
8 ENSG00000267070 NA 4.5236 0.0000
9 ENSG00000273623 NA 4.5236 0.0000
10 ENSG00000152433 ZNF547 zinc finger protein 547 4.4594 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000253930 TNFRSF10A-AS1 TNFRSF10A antisense RNA 1 -3.5367 0.0063
63646 ENSG00000232254 CSF2RBP1 colony stimulating factor 2 receptor beta common subunit pseudogene 1 -3.5306 0.1815
63645 ENSG00000269802 NA -3.5296 0.0019
63644 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 -3.5289 0.0000
63643 ENSG00000164164 OTUD4 OTU deubiquitinase 4 -3.5240 0.0020
63642 ENSG00000238280 NA -3.5236 0.1681
63641 ENSG00000181915 ADO 2-aminoethanethiol dioxygenase -3.5236 0.1681
63640 ENSG00000260542 NA -3.5222 0.0725
63639 ENSG00000252128 NA -3.5222 0.3973
63638 ENSG00000226107 NA -3.5222 0.3973

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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