SHOGoiN Cell Methylome: GSM1849308

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849308


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7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M4Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000278594 NA 4.6439 0.0000
2 ENSG00000283636 Metazoan signal recognition particle RNA 4.6439 0.0000
3 ENSG00000201713 RNA5SP125 RNA, 5S ribosomal pseudogene 125 4.4594 0.0000
4 ENSG00000229696 KARSP1 lysyl-tRNA synthetase pseudogene 1 4.4594 0.0000
5 ENSG00000278159 MIR8062 microRNA 8062 4.4594 0.0000
6 ENSG00000228209 NA 4.3923 0.0000
7 ENSG00000267871 NA 4.3923 0.0000
8 ENSG00000260932 NA 4.3294 0.0000
9 ENSG00000240494 NA 4.3219 0.0000
10 ENSG00000248635 NA 4.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000226835 NA -3.8416 0.0000
63818 ENSG00000228995 MTND1P9 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 pseudogene 9 -3.8342 0.0000
63817 ENSG00000283333 MIR7977 microRNA 7977 -3.8074 0.6224
63816 ENSG00000268581 SIGLEC18P sialic acid binding Ig like lectin 18, pseudogene -3.8074 0.6224
63815 ENSG00000261014 LINC02165 long intergenic non-protein coding RNA 2165 -3.8074 0.6224
63814 ENSG00000255644 NA -3.8074 0.6224
63813 ENSG00000254399 GLYATL1P4 glycine-N-acyltransferase like 1 pseudogene 4 -3.8074 0.6224
63812 ENSG00000253334 NA -3.8074 0.6224
63811 ENSG00000235366 LINC01055 long intergenic non-protein coding RNA 1055 -3.8074 0.6224
63810 ENSG00000234359 ELK1P1 ELK1, member of ETS oncogene family pseudogene 1 -3.8074 0.1649

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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