SHOGoiN Cell Methylome: GSM1849309

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849309


Profile download
7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M5Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000264812 NA 4.7549 0.0000
2 ENSG00000216307 NA 4.5236 0.0000
3 ENSG00000237716 NA 4.5236 0.0000
4 ENSG00000225956 NA 4.4594 0.0000
5 ENSG00000251523 NA 4.4594 0.0000
6 ENSG00000199855 RNU6-490P RNA, U6 small nuclear 490, pseudogene 4.3923 0.0000
7 ENSG00000230079 STK24P1 serine/threonine kinase 24 pseudogene 1 4.3923 0.0000
8 ENSG00000239742 RN7SL672P RNA, 7SL, cytoplasmic 672, pseudogene 4.3219 0.0000
9 ENSG00000246777 NA 4.3219 0.0000
10 ENSG00000214195 HMGN2P31 high mobility group nucleosomal binding domain 2 pseudogene 31 4.2479 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000274915 NA -3.3219 0.0709
63646 ENSG00000273768 NA -3.3219 0.1648
63645 ENSG00000273245 NA -3.3219 1.0000
63644 ENSG00000271519 NA -3.3219 1.0000
63643 ENSG00000270858 VDAC1P5 voltage dependent anion channel 1 pseudogene 5 -3.3219 1.0000
63642 ENSG00000270578 NA -3.3219 0.3939
63641 ENSG00000267509 NA -3.3219 0.3939
63640 ENSG00000267034 NA -3.3219 1.0000
63639 ENSG00000265240 NA -3.3219 1.0000
63638 ENSG00000260581 NA -3.3219 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...