SHOGoiN Cell Methylome: GSM1849310

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849310


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6020800-755Sequence Read ArchiveSRP062328SRP062328_M6Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000226721 EEF1DP2 eukaryotic translation elongation factor 1 delta pseudogene 2 4.5850 0.0000
2 ENSG00000269886 NA 4.3219 0.0000
3 ENSG00000227407 NA 4.1699 0.0000
4 ENSG00000254252 RPL7P20 ribosomal protein L7 pseudogene 20 4.1699 0.0000
5 ENSG00000254350 NA 4.1699 0.0000
6 ENSG00000258719 NA 4.1699 0.0000
7 ENSG00000267838 NA 4.1699 0.0000
8 ENSG00000268496 NA 4.1699 0.0000
9 ENSG00000269873 NA 4.1699 0.0000
10 ENSG00000271239 NA 4.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000253771 TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1 -3.5850 0.3816
63818 ENSG00000253224 PGAM5P1 PGAM family member 5, mitochondrial serine/threonine protein phosphatase pseudogene 1 -3.5850 0.0282
63817 ENSG00000251506 NA -3.5850 0.1007
63816 ENSG00000251055 NA -3.5850 0.3816
63815 ENSG00000250620 LINC02515 long intergenic non-protein coding RNA 2515 -3.5850 0.0083
63814 ENSG00000250053 RARRES2P4 retinoic acid receptor responder 2 pseudogene 4 -3.5850 0.3816
63813 ENSG00000250026 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene -3.5850 0.3816
63812 ENSG00000248184 LINC02283 long intergenic non-protein coding RNA 2283 -3.5850 0.3816
63811 ENSG00000241745 RN7SL788P RNA, 7SL, cytoplasmic 788, pseudogene -3.5850 0.3816
63810 ENSG00000240131 NA -3.5850 0.3816

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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