SHOGoiN Cell Methylome: GSM1849310

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849310


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5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M6Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000226721 EEF1DP2 eukaryotic translation elongation factor 1 delta pseudogene 2 4.5850 0.0000
2 ENSG00000269886 NA 4.3219 0.0000
3 ENSG00000227407 NA 4.1699 0.0000
4 ENSG00000254252 RPL7P20 ribosomal protein L7 pseudogene 20 4.1699 0.0000
5 ENSG00000254350 NA 4.1699 0.0000
6 ENSG00000258719 NA 4.1699 0.0000
7 ENSG00000267838 NA 4.1699 0.0000
8 ENSG00000268496 NA 4.1699 0.0000
9 ENSG00000269873 NA 4.1699 0.0000
10 ENSG00000271239 NA 4.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000102309 PIN4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4 -3.2218 0.0004
63646 ENSG00000272734 ADIRF-AS1 ADIRF antisense RNA 1 -3.2139 0.0014
63645 ENSG00000284300 NA -3.2106 0.0000
63644 ENSG00000275206 NA -3.2098 0.1742
63643 ENSG00000267441 NA -3.2098 0.1742
63642 ENSG00000264177 NA -3.2098 0.1742
63641 ENSG00000263963 MIR4461 microRNA 4461 -3.2019 0.0000
63640 ENSG00000247627 MTND4P12 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 12 -3.2019 0.0000
63639 ENSG00000242473 KIR2DP1 killer cell immunoglobulin like receptor, two Ig domains pseudogene 1 -3.1924 0.0000
63638 ENSG00000269028 MTRNR2L12 MT-RNR2-like 12 -3.1772 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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