SHOGoiN Cell Methylome: GSM1849311

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849311


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5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M7Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000260171 NA 7.8765 0.0000
2 ENSG00000280665 NA 7.8329 0.0000
3 ENSG00000188691 OR56A5 olfactory receptor family 56 subfamily A member 5 7.7698 0.0000
4 ENSG00000252091 RNU6-1146P RNA, U6 small nuclear 1146, pseudogene 7.4998 0.0000
5 ENSG00000232707 AP1B1P2 adaptor related protein complex 1 beta 1 subunit pseudogene 2 7.4429 0.0000
6 ENSG00000237439 NA 7.4429 0.0000
7 ENSG00000214344 OR4F13P olfactory receptor family 4 subfamily F member 13 pseudogene 7.3399 0.0000
8 ENSG00000215493 NA 7.2668 0.0000
9 ENSG00000250330 NA 7.2288 0.0000
10 ENSG00000202324 RNA5SP366 RNA, 5S ribosomal pseudogene 366 7.1997 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000241738 ZNF90P1 zinc finger protein 90 pseudogene 1 -5.8580 0.0093
63646 ENSG00000231839 NA -5.8580 0.0093
63645 ENSG00000223968 NA -5.8580 0.0093
63644 ENSG00000218689 RPL5P21 ribosomal protein L5 pseudogene 21 -5.8580 0.0093
63643 ENSG00000200259 SNORD35A small nucleolar RNA, C/D box 35A -5.8547 0.0000
63642 ENSG00000160908 ZNF394 zinc finger protein 394 -5.8537 0.0000
63641 ENSG00000255535 NA -5.8429 0.0000
63640 ENSG00000255262 ELOBP2 elongin B pseudogene 2 -5.8429 0.0000
63639 ENSG00000200857 NA -5.8419 0.0000
63638 ENSG00000240002 YBX1P3 Y-box binding protein 1 pseudogene 3 -5.8331 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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