SHOGoiN Cell Methylome: GSM1849312

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849312


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7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M8Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000200677 Small nucleolar RNA SNORD18 8.2479 0.0000
2 ENSG00000279259 NA 7.7177 0.0000
3 ENSG00000256248 NA 7.6073 0.0000
4 ENSG00000279310 NA 7.6073 0.0000
5 ENSG00000213235 EEF1A1P16 eukaryotic translation elongation factor 1 alpha 1 pseudogene 16 7.5999 0.0000
6 ENSG00000256211 NA 7.5999 0.0000
7 ENSG00000213928 IRF9 interferon regulatory factor 9 7.4094 0.0000
8 ENSG00000230394 NA 7.3923 0.0000
9 ENSG00000260914 NA 7.2946 0.0000
10 ENSG00000181788 SIAH2 siah E3 ubiquitin protein ligase 2 7.2854 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000148156 ACTL7B actin like 7B -6.6147 0.0005
63818 ENSG00000228559 NA -6.5999 0.0005
63817 ENSG00000223791 UBE2E1-AS1 UBE2E1 antisense RNA 1 -6.5850 0.0005
63816 ENSG00000236888 RPS20P5 ribosomal protein S20 pseudogene 5 -6.5821 0.0000
63815 ENSG00000206877 RNU6-1103P RNA, U6 small nuclear 1103, pseudogene -6.5715 0.0000
63814 ENSG00000203489 HMGB1P39 high mobility group box 1 pseudogene 39 -6.5699 0.0000
63813 ENSG00000242794 RN7SL299P RNA, 7SL, cytoplasmic 299, pseudogene -6.5699 0.0005
63812 ENSG00000224436 NA -6.5699 0.0005
63811 ENSG00000219150 NA -6.5699 0.0005
63810 ENSG00000237735 NA -6.5546 0.0008

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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