SHOGoiN Cell Methylome: GSM1849313

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849313


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5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M9Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000233643 NA 5.7279 0.0000
2 ENSG00000228707 NA 5.5236 0.0000
3 ENSG00000269836 NA 5.5236 0.0000
4 ENSG00000276764 Metazoan signal recognition particle RNA 5.4594 0.0000
5 ENSG00000233651 NA 5.3923 0.0000
6 ENSG00000207956 MIR579 microRNA 579 5.3219 0.0000
7 ENSG00000266977 NA 5.3219 0.0000
8 ENSG00000222035 NA 5.2854 0.0000
9 ENSG00000237926 NA 5.2854 0.0000
10 ENSG00000275888 NA 5.2760 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000255009 UBTFL1 upstream binding transcription factor, RNA polymerase I-like 1 -4.5850 0.0017
63818 ENSG00000251283 LINC02272 long intergenic non-protein coding RNA 2272 -4.5850 0.1614
63817 ENSG00000249479 NA -4.5850 0.1614
63816 ENSG00000248050 NA -4.5850 0.0017
63815 ENSG00000245105 A2M-AS1 A2M antisense RNA 1 (head to head) -4.5850 0.1614
63814 ENSG00000237844 NA -4.5850 0.1614
63813 ENSG00000227088 NA -4.5850 0.1614
63812 ENSG00000217809 FAT1P1 FAT atypical cadherin 1 pseudogene 1 -4.5850 0.1614
63811 ENSG00000214851 LINC00612 long intergenic non-protein coding RNA 612 -4.5850 0.1614
63810 ENSG00000205662 FAM239C family with sequence similarity 239 member C (non-protein coding) -4.5850 0.1614

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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