SHOGoiN Cell Methylome: GSM1849313

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849313


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5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M9Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000233643 NA 5.7279 0.0000
2 ENSG00000228707 NA 5.5236 0.0000
3 ENSG00000269836 NA 5.5236 0.0000
4 ENSG00000276764 NA 5.4594 0.0000
5 ENSG00000233651 NA 5.3923 0.0000
6 ENSG00000207956 MIR579 microRNA 579 5.3219 0.0000
7 ENSG00000266977 NA 5.3219 0.0000
8 ENSG00000222035 NA 5.2854 0.0000
9 ENSG00000237926 NA 5.2854 0.0000
10 ENSG00000275888 NA 5.2760 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000231147 ARHGAP42P2 Rho GTPase activating protein 42 pseudogene 2 -4.1944 0.0085
63646 ENSG00000261863 LINC01996 long intergenic non-protein coding RNA 1996 -4.1929 0.0000
63645 ENSG00000216809 NA -4.1896 0.0090
63644 ENSG00000237819 NA -4.1889 0.0000
63643 ENSG00000237880 LINC01885 long intergenic non-protein coding RNA 1885 -4.1745 0.0000
63642 ENSG00000239354 RPS17P15 ribosomal protein S17 pseudogene 15 -4.1699 0.4013
63641 ENSG00000230471 NA -4.1699 0.4013
63640 ENSG00000226276 NA -4.1699 0.4013
63639 ENSG00000225947 NA -4.1699 0.4013
63638 ENSG00000224829 TOMM20P1 TOMM20 pseudogene 1 -4.1699 0.0734

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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