SHOGoiN Cell Methylome: GSM1849314

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849314


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5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M10Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000274883 NA 5.9307 0.0000
2 ENSG00000228650 NA 5.6724 0.0000
3 ENSG00000279917 NA 5.6724 0.0000
4 ENSG00000235357 LINC01621 long intergenic non-protein coding RNA 1621 5.6439 0.0000
5 ENSG00000232774 NA 5.5546 0.0000
6 ENSG00000250548 LINC01303 long intergenic non-protein coding RNA 1303 5.5546 0.0000
7 ENSG00000242266 RN7SL456P RNA, 7SL, cytoplasmic 456, pseudogene 5.4919 0.0000
8 ENSG00000220660 NA 5.4594 0.0000
9 ENSG00000252291 NA 5.4594 0.0000
10 ENSG00000206887 RNU6-1008P RNA, U6 small nuclear 1008, pseudogene 5.4263 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000269304 FKBP1AP1 FK506 binding protein 1A pseudogene 1 -4.1841 0.0000
63646 ENSG00000189403 HMGB1 high mobility group box 1 -4.1796 0.0000
63645 ENSG00000249240 NA -4.1787 0.0000
63644 ENSG00000248106 NA -4.1702 0.0000
63643 ENSG00000277717 NA -4.1699 0.3992
63642 ENSG00000276474 NA -4.1699 0.3992
63641 ENSG00000272094 NA -4.1699 0.3992
63640 ENSG00000269391 NA -4.1699 0.0721
63639 ENSG00000264837 VN1R71P vomeronasal 1 receptor 71 pseudogene -4.1699 0.3992
63638 ENSG00000257906 LINC02156 long intergenic non-protein coding RNA 2156 -4.1699 0.0138

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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