SHOGoiN Cell Methylome: GSM1849315

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849315


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7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M11Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000201885 Y RNA 5.3576 0.0000
2 ENSG00000281721 NA 5.0000 0.0000
3 ENSG00000196704 AMZ2 archaelysin family metallopeptidase 2 4.8074 0.0000
4 ENSG00000249407 IL20RB-AS1 IL20RB antisense RNA 1 4.7549 0.0000
5 ENSG00000280368 NA 4.7004 0.0000
6 ENSG00000280449 NA 4.7004 0.0000
7 ENSG00000277818 Y RNA 4.6733 0.0000
8 ENSG00000255548 NA 4.6439 0.0000
9 ENSG00000255988 TUBB4BP1 tubulin beta 4B class IVb pseudogene 1 4.6439 0.0000
10 ENSG00000256079 NA 4.6439 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000227646 STEAP2-AS1 STEAP2 antisense RNA 1 -4.0875 0.3918
63818 ENSG00000226781 TBCAP1 tubulin folding cofactor A pseudogene 1 -4.0875 0.0319
63817 ENSG00000225840 NA -4.0875 0.0319
63816 ENSG00000225626 C9orf135-AS1 C9orf135 antisense RNA 1 (head to head) -4.0875 0.1080
63815 ENSG00000225136 PGBD4P5 piggyBac transposable element derived 4 pseudogene 5 -4.0875 0.1080
63814 ENSG00000204711 C9orf135 chromosome 9 open reading frame 135 -4.0875 0.1080
63813 ENSG00000204544 MUC21 mucin 21, cell surface associated -4.0875 0.3918
63812 ENSG00000188558 OR2G6 olfactory receptor family 2 subfamily G member 6 -4.0875 0.3918
63811 ENSG00000186517 ARHGAP30 Rho GTPase activating protein 30 -4.0875 0.1080
63810 ENSG00000182810 DDX28 DEAD-box helicase 28 -4.0307 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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