SHOGoiN Cell Methylome: GSM1849315

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849315


Profile download
7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M11Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000201885 NA 5.3576 0.0000
2 ENSG00000281721 LINC01080 long intergenic non-protein coding RNA 1080 5.0000 0.0000
3 ENSG00000196704 AMZ2 archaelysin family metallopeptidase 2 4.8074 0.0000
4 ENSG00000249407 IL20RB-AS1 IL20RB antisense RNA 1 4.7549 0.0000
5 ENSG00000280368 NA 4.7004 0.0000
6 ENSG00000280449 NA 4.7004 0.0000
7 ENSG00000277818 NA 4.6733 0.0000
8 ENSG00000255548 NA 4.6439 0.0000
9 ENSG00000255988 TUBB4BP1 tubulin beta 4B class IVb pseudogene 1 4.6439 0.0000
10 ENSG00000256079 NA 4.6439 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000244112 RN7SL508P RNA, 7SL, cytoplasmic 508, pseudogene -3.5949 0.1118
63646 ENSG00000198868 MTND4LP30 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4L pseudogene 30 -3.5894 0.0000
63645 ENSG00000089327 FXYD5 FXYD domain containing ion transport regulator 5 -3.5870 0.0061
63644 ENSG00000283025 NA -3.5850 0.2590
63643 ENSG00000280362 NA -3.5850 0.0493
63642 ENSG00000278395 NA -3.5850 0.2530
63641 ENSG00000278039 NA -3.5850 0.2530
63640 ENSG00000276524 NA -3.5850 0.1094
63639 ENSG00000267091 CTBP2P7 C-terminal binding protein 2 pseudogene 7 -3.5850 0.2530
63638 ENSG00000267042 NA -3.5850 0.6159

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...