SHOGoiN Cell Methylome: GSM1849316

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849316


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9210600-755Sequence Read ArchiveSRP062328SRP062328_M12Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000206697 RNY1P8 RNA, Ro-associated Y1 pseudogene 8 7.2946 0.0000
2 ENSG00000184414 IRS3P insulin receptor substrate 3, pseudogene 7.2854 0.0000
3 ENSG00000227264 ACTR3BP5 ACTR3B pseudogene 5 6.9773 0.0000
4 ENSG00000227521 NA 6.9069 0.0000
5 ENSG00000231857 MORF4L1P5 mortality factor 4 like 1 pseudogene 5 6.8455 0.0000
6 ENSG00000181023 OR56B1 olfactory receptor family 56 subfamily B member 1 6.8202 0.0000
7 ENSG00000228638 FCF1P2 FCF1 pseudogene 2 6.7961 0.0000
8 ENSG00000239439 RFKP2 riboflavin kinase pseudogene 2 6.7347 0.0000
9 ENSG00000235467 RPL10AP5 ribosomal protein L10a pseudogene 5 6.6582 0.0000
10 ENSG00000237672 KRR1P1 KRR1, small subunit processome component homolog pseudogene 1 6.6450 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000239998 LILRA2 leukocyte immunoglobulin like receptor A2 -6.0224 0.0001
63818 ENSG00000126251 GPR42 G protein-coupled receptor 42 (gene/pseudogene) -6.0224 0.0141
63817 ENSG00000206150 RNASE13 ribonuclease A family member 13 (inactive) -6.0019 0.0000
63816 ENSG00000280350 LINC01726 long intergenic non-protein coding RNA 1726 -5.9824 0.0000
63815 ENSG00000266431 MIR5580 microRNA 5580 -5.9773 0.0229
63814 ENSG00000224674 EIF3EP2 eukaryotic translation initiation factor 3 subunit E pseudogene 2 -5.9773 0.0016
63813 ENSG00000249349 NA -5.9542 0.0000
63812 ENSG00000232709 MARK2P9 microtubule affinity regulating kinase 2 pseudogene 9 -5.9542 0.0222
63811 ENSG00000224620 MEF2AP1 myocyte enhancer factor 2A pseudogene 1 -5.9307 0.0003
63810 ENSG00000256609 NA -5.9228 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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