SHOGoiN Cell Methylome: GSM1849318

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849318


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7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M14Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000225591 NA 4.7004 0.0000
2 ENSG00000275024 NA 4.6439 0.0000
3 ENSG00000147885 IFNA16 interferon alpha 16 4.5236 0.0000
4 ENSG00000253389 NA 4.4594 0.0000
5 ENSG00000274705 MIR486-1 microRNA 486-1 4.4594 0.0000
6 ENSG00000283450 MIR486-2 microRNA 486-2 4.4594 0.0000
7 ENSG00000201431 RNU6-1277P RNA, U6 small nuclear 1277, pseudogene 4.4259 0.0000
8 ENSG00000235746 CTBP2P2 C-terminal binding protein 2 pseudogene 2 4.3923 0.0000
9 ENSG00000251221 LINC01337 long intergenic non-protein coding RNA 1337 4.3747 0.0000
10 ENSG00000228999 NA 4.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000242152 NA -3.3219 1.0000
63646 ENSG00000240186 RN7SL633P RNA, 7SL, cytoplasmic 633, pseudogene -3.3219 0.3931
63645 ENSG00000237323 NA -3.3219 1.0000
63644 ENSG00000237311 NA -3.3219 0.3931
63643 ENSG00000236994 YBX1P9 Y-box binding protein 1 pseudogene 9 -3.3219 0.0000
63642 ENSG00000236748 NA -3.3219 0.3931
63641 ENSG00000236335 NA -3.3219 1.0000
63640 ENSG00000234851 RPL23AP42 ribosomal protein L23a pseudogene 42 -3.3219 1.0000
63639 ENSG00000232168 P2RY10BP P2Y receptor family member 10B, pseudogene -3.3219 0.0091
63638 ENSG00000231574 LINC02015 long intergenic non-protein coding RNA 2015 -3.3219 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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