SHOGoiN Cell Methylome: GSM1849319

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849319


Profile download
7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M15Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000243338 RN7SL307P RNA, 7SL, cytoplasmic 307, pseudogene 6.0000 0.0000
2 ENSG00000235123 DSCAM-AS1 DSCAM antisense RNA 1 5.9307 0.0000
3 ENSG00000277687 NA 5.7814 0.0000
4 ENSG00000250020 NA 5.6293 0.0000
5 ENSG00000168288 MMADHC methylmalonic aciduria and homocystinuria, cblD type 5.6147 0.0000
6 ENSG00000212257 RNU6-1176P RNA, U6 small nuclear 1176, pseudogene 5.6147 0.0000
7 ENSG00000231969 NA 5.6147 0.0000
8 ENSG00000237011 NA 5.6147 0.0000
9 ENSG00000249019 NA 5.5850 0.0000
10 ENSG00000222436 RN7SKP278 RNA, 7SK small nuclear pseudogene 278 5.5546 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000233545 CYCSP33 cytochrome c, somatic pseudogene 33 -3.9069 0.0030
63646 ENSG00000228645 PHKG1P2 phosphorylase kinase catalytic subunit gamma 1 pseudogene 2 -3.9069 0.2439
63645 ENSG00000226670 BCAS2P3 BCAS2, pre-mRNA processing factor pseudogene 3 -3.9069 0.2439
63644 ENSG00000222210 RN7SKP65 RNA, 7SK small nuclear pseudogene 65 -3.9069 0.2439
63643 ENSG00000206640 NA -3.9069 0.2439
63642 ENSG00000200331 RNU6-183P RNA, U6 small nuclear 183, pseudogene -3.9069 0.2439
63641 ENSG00000181656 GPR88 G protein-coupled receptor 88 -3.9069 0.0030
63640 ENSG00000177733 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 -3.9069 0.2439
63639 ENSG00000169826 CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 -3.9069 0.0000
63638 ENSG00000227811 FAM212B-AS1 FAM212B antisense RNA 1 -3.9068 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...