SHOGoiN Cell Methylome: GSM1849319

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849319


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7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M15Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000243338 RN7SL307P RNA, 7SL, cytoplasmic 307, pseudogene 6.0000 0.0000
2 ENSG00000235123 DSCAM-AS1 DSCAM antisense RNA 1 5.9307 0.0000
3 ENSG00000277687 NA 5.7814 0.0000
4 ENSG00000250020 NA 5.6293 0.0000
5 ENSG00000168288 MMADHC methylmalonic aciduria and homocystinuria, cblD type 5.6147 0.0000
6 ENSG00000212257 RNU6-1176P RNA, U6 small nuclear 1176, pseudogene 5.6147 0.0000
7 ENSG00000231969 NA 5.6147 0.0000
8 ENSG00000237011 NA 5.6147 0.0000
9 ENSG00000249019 NA 5.5850 0.0000
10 ENSG00000222436 RN7SKP278 RNA, 7SK small nuclear pseudogene 278 5.5546 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 -4.5499 0.0000
63818 ENSG00000236464 LINC02559 long intergenic non-protein coding RNA 2559 -4.5236 0.0627
63817 ENSG00000231201 NA -4.5236 0.0627
63816 ENSG00000229770 NA -4.5236 0.0627
63815 ENSG00000182330 PRAMEF8 PRAME family member 8 -4.5236 0.0627
63814 ENSG00000233073 NA -4.5222 0.0019
63813 ENSG00000255663 NA -4.4702 0.0000
63812 ENSG00000180425 C11orf71 chromosome 11 open reading frame 71 -4.4702 0.0000
63811 ENSG00000076053 RBM7 RNA binding motif protein 7 -4.4702 0.0000
63810 ENSG00000261569 NA -4.4594 0.0617

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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