SHOGoiN Cell Methylome: GSM1849321

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849321


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5030203000000000000000-761Sequence Read ArchiveSRP062328SRP062328_M17Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000183161 FANCF Fanconi anemia complementation group F 5.2479 0.0000
2 ENSG00000228446 NA 5.2479 0.0000
3 ENSG00000220804 LINC01881 long intergenic non-protein coding RNA 1881 5.1699 0.0000
4 ENSG00000224160 CICP10 capicua transcriptional repressor pseudogene 10 5.1699 0.0000
5 ENSG00000244528 SEPT14P2 septin 14 pseudogene 2 5.1699 0.0000
6 ENSG00000234515 PPP1R2P1 protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 1 5.1333 0.0000
7 ENSG00000163961 RNF168 ring finger protein 168 5.0330 0.0000
8 ENSG00000251350 LINC02475 long intergenic non-protein coding RNA 2475 5.0000 0.0000
9 ENSG00000229679 NA 4.9843 0.0000
10 ENSG00000116014 KISS1R KISS1 receptor 4.9069 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000147138 GPR174 G protein-coupled receptor 174 -4.0875 1.0000
63646 ENSG00000134042 MRO maestro -4.0875 1.0000
63645 ENSG00000131183 SLC34A1 solute carrier family 34 member 1 -4.0875 1.0000
63644 ENSG00000106331 PAX4 paired box 4 -4.0875 1.0000
63643 ENSG00000101846 STS steroid sulfatase -4.0875 0.2601
63642 ENSG00000228716 DHFR dihydrofolate reductase -4.0777 0.0000
63641 ENSG00000253281 NA -4.0566 0.1129
63640 ENSG00000237552 LINC02567 long intergenic non-protein coding RNA 2567 -4.0464 0.2601
63639 ENSG00000231471 HMGN2P34 high mobility group nucleosomal binding domain 2 pseudogene 34 -4.0452 0.1140
63638 ENSG00000234841 NA -4.0368 0.0500

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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