SHOGoiN Cell Methylome: GSM1849321

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849321


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6020500-761Sequence Read ArchiveSRP062328SRP062328_M17Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000183161 FANCF Fanconi anemia complementation group F 5.2479 0.0000
2 ENSG00000228446 NA 5.2479 0.0000
3 ENSG00000220804 LINC01881 long intergenic non-protein coding RNA 1881 5.1699 0.0000
4 ENSG00000224160 CICP10 capicua transcriptional repressor pseudogene 10 5.1699 0.0000
5 ENSG00000244528 SEPT14P2 septin 14 pseudogene 2 5.1699 0.0000
6 ENSG00000234515 PPP1R2P1 protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 1 5.1333 0.0000
7 ENSG00000163961 RNF168 ring finger protein 168 5.0330 0.0000
8 ENSG00000251350 LINC02475 long intergenic non-protein coding RNA 2475 5.0000 0.0000
9 ENSG00000229679 NA 4.9843 0.0000
10 ENSG00000116014 KISS1R KISS1 receptor 4.9069 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000264364 DYNLL2 dynein light chain LC8-type 2 -4.3923 0.6249
63818 ENSG00000254455 HIGD1AP10 HIG1 hypoxia inducible domain family member 1A pseudogene 10 -4.3923 0.6249
63817 ENSG00000237521 OR7E24 olfactory receptor family 7 subfamily E member 24 -4.3923 0.6249
63816 ENSG00000231366 RPS26P40 ribosomal protein S26 pseudogene 40 -4.3923 0.6249
63815 ENSG00000231205 ZNF826P zinc finger protein 826, pseudogene -4.3923 0.1709
63814 ENSG00000229274 NA -4.3923 0.6249
63813 ENSG00000225899 FRG2B FSHD region gene 2 family member B -4.3923 0.6249
63812 ENSG00000225163 LINC00618 long intergenic non-protein coding RNA 618 -4.3923 0.1709
63811 ENSG00000218891 ZNF579 zinc finger protein 579 -4.3923 0.6249
63810 ENSG00000205794 NA -4.3923 0.0804

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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