SHOGoiN Cell Methylome: GSM1849322

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849322


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5030203000000000000000-761Sequence Read ArchiveSRP062328SRP062328_M18Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000140450 ARRDC4 arrestin domain containing 4 5.5546 0.0000
2 ENSG00000254273 NA 5.3923 0.0000
3 ENSG00000267013 LINC01929 long intergenic non-protein coding RNA 1929 5.3923 0.0000
4 ENSG00000135315 CEP162 centrosomal protein 162 5.3576 0.0000
5 ENSG00000184995 IFNE interferon epsilon 5.3219 0.0000
6 ENSG00000210841 RNU6ATAC26P RNA, U6atac small nuclear 26, pseudogene 5.3219 0.0000
7 ENSG00000237927 NA 5.2849 0.0000
8 ENSG00000240997 RN7SL183P RNA, 7SL, cytoplasmic 183, pseudogene 5.2277 0.0000
9 ENSG00000134538 SLCO1B1 solute carrier organic anion transporter family member 1B1 5.1699 0.0000
10 ENSG00000232719 NA 5.1699 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000168255 POLR2J3 RNA polymerase II subunit J3 -4.0035 0.0000
63646 ENSG00000105808 RASA4 RAS p21 protein activator 4 -4.0035 0.0000
63645 ENSG00000283132 NA -4.0000 0.0063
63644 ENSG00000278734 NA -4.0000 0.0748
63643 ENSG00000278265 MIR6770-1 microRNA 6770-1 -4.0000 0.6203
63642 ENSG00000276110 NA -4.0000 0.6203
63641 ENSG00000273198 NA -4.0000 0.6203
63640 ENSG00000270726 NA -4.0000 0.2714
63639 ENSG00000270052 NA -4.0000 0.6203
63638 ENSG00000265883 NA -4.0000 0.6203

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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