SHOGoiN Cell Methylome: GSM1849323

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849323


Profile download
5030203000000000000000-761Sequence Read ArchiveSRP062328SRP062328_M19Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000260398 NA 5.2089 0.0000
2 ENSG00000228509 NA 5.1699 0.0000
3 ENSG00000258479 LINC00640 long intergenic non-protein coding RNA 640 5.1496 0.0000
4 ENSG00000199415 RNA5SP370 RNA, 5S ribosomal pseudogene 370 5.1293 0.0000
5 ENSG00000248968 NA 4.9542 0.0000
6 ENSG00000213671 OLA1P2 Obg-like ATPase 1 pseudogene 2 4.9069 0.0000
7 ENSG00000232713 NA 4.9069 0.0000
8 ENSG00000259149 NA 4.8074 0.0000
9 ENSG00000267098 NA 4.8074 0.0000
10 ENSG00000226427 HMGN2P7 high mobility group nucleosomal binding domain 2 pseudogene 7 4.7680 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000170373 CST1 cystatin SN -3.7889 0.1811
63646 ENSG00000177776 RPS2P2 ribosomal protein S2 pseudogene 2 -3.7816 0.2640
63645 ENSG00000201823 SNORD48 small nucleolar RNA, C/D box 48 -3.7800 0.5190
63644 ENSG00000250709 CCDC169-SOHLH2 CCDC169-SOHLH2 readthrough -3.7796 0.0167
63643 ENSG00000242715 CCDC169 coiled-coil domain containing 169 -3.7796 0.0167
63642 ENSG00000120436 GPR31 G protein-coupled receptor 31 -3.7786 0.0107
63641 ENSG00000252535 RNA5SP254 RNA, 5S ribosomal pseudogene 254 -3.7740 0.2627
63640 ENSG00000231768 LINC01354 long intergenic non-protein coding RNA 1354 -3.7693 0.2620
63639 ENSG00000203995 ZYG11A zyg-11 family member A, cell cycle regulator -3.7644 0.0346
63638 ENSG00000260473 NA -3.7623 0.0506

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...