SHOGoiN Cell Methylome: GSM1849323

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849323


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5030203000000000000000-761Sequence Read ArchiveSRP062328SRP062328_M19Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000260398 NA 5.2089 0.0000
2 ENSG00000228509 NA 5.1699 0.0000
3 ENSG00000258479 LINC00640 long intergenic non-protein coding RNA 640 5.1496 0.0000
4 ENSG00000199415 RNA5SP370 RNA, 5S ribosomal pseudogene 370 5.1293 0.0000
5 ENSG00000248968 NA 4.9542 0.0000
6 ENSG00000213671 OLA1P2 Obg-like ATPase 1 pseudogene 2 4.9069 0.0000
7 ENSG00000232713 NA 4.9069 0.0000
8 ENSG00000259149 NA 4.8074 0.0000
9 ENSG00000267098 NA 4.8074 0.0000
10 ENSG00000226427 HMGN2P7 high mobility group nucleosomal binding domain 2 pseudogene 7 4.7680 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000269524 NA -4.1699 0.0798
63818 ENSG00000268884 NA -4.1699 0.4106
63817 ENSG00000259083 NA -4.1699 0.0798
63816 ENSG00000258167 NA -4.1699 0.1786
63815 ENSG00000251204 NA -4.1699 1.0000
63814 ENSG00000249189 NA -4.1699 0.0798
63813 ENSG00000244345 NA -4.1699 1.0000
63812 ENSG00000238055 NA -4.1699 1.0000
63811 ENSG00000235803 MTCO2P23 mitochondrially encoded cytochrome c oxidase II pseudogene 23 -4.1699 1.0000
63810 ENSG00000235524 MTCO1P23 mitochondrially encoded cytochrome c oxidase I pseudogene 23 -4.1699 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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