SHOGoiN Cell Methylome: GSM2026493

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026493


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M1Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000091481 Gm17154 predicted gene 17154 7.6900 0.0000
2 ENSMUSG00000032750 Gab3 GRB2-associated-binding protein 3 7.6653 0.0000
3 ENSMUSG00000065798 Gm25518 predicted gene, 25518 7.6294 0.0000
4 ENSMUSG00000034552 Zswim2 zinc finger SWIM-type containing 2 7.6293 0.0000
5 ENSMUSG00000040537 Adam22 Disintegrin and metalloproteinase domain-containing protein 22 7.2614 0.0000
6 ENSMUSG00000055069 Rab39 RAB39, member RAS oncogene family 7.2336 0.0000
7 ENSMUSG00000038279 Nop2 NOP2 nucleolar protein 7.1997 0.0000
8 ENSMUSG00000110525 Gm45893 predicted gene 45893 7.1599 0.0000
9 ENSMUSG00000088885 Gm24217 predicted gene, 24217 7.1446 0.0000
10 ENSMUSG00000073980 Gm9574 predicted gene 9574 7.1137 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000106568 Gm42814 predicted gene 42814 -6.4592 0.0000
50997 ENSMUSG00000050144 Slc25a44 solute carrier family 25, member 44 -6.4592 0.0000
50996 ENSMUSG00000099068 Gm27861 predicted gene, 27861 -6.4512 0.0000
50995 ENSMUSG00000106589 4931419H13Rik RIKEN cDNA 4931419H13 gene -6.4429 0.0012
50994 ENSMUSG00000036315 Znrd1 zinc ribbon domain containing, 1 -6.4411 0.0000
50993 ENSMUSG00000036214 Znrd1as zinc ribbon domain containing 1, antisense -6.4411 0.0000
50992 ENSMUSG00000030544 Mesp1 Mesoderm posterior protein 1 -6.4362 0.0000
50991 ENSMUSG00000084168 Atp5l2-ps ATP synthase, H+ transporting, mitochondrial FO complex, subunit G2, pseudogene -6.4342 0.0000
50990 ENSMUSG00000037885 Stk35 Serine/threonine-protein kinase 35 -6.4319 0.0000
50989 ENSMUSG00000110350 Gm10252 NA -6.4269 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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