SHOGoiN Cell Methylome: GSM2026494

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026494


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M2Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110725 Gm47129 predicted gene, 47129 7.1599 0.0000
2 ENSMUSG00000047749 Zc3hav1l zinc finger CCCH-type, antiviral 1-like 6.7808 0.0000
3 ENSMUSG00000110525 Gm45893 predicted gene 45893 6.7279 0.0000
4 ENSMUSG00000103017 Gm37505 predicted gene, 37505 6.6721 0.0000
5 ENSMUSG00000108149 Olfr439-ps1 olfactory receptor 439, pseudogene 1 6.5733 0.0000
6 ENSMUSG00000109847 Gm45278 predicted gene 45278 6.5685 0.0000
7 ENSMUSG00000066592 Gm7589 predicted gene 7589 6.5392 0.0000
8 ENSMUSG00000022986 Krt75 Keratin, type II cytoskeletal 75 6.5236 0.0000
9 ENSMUSG00000100400 Gm29326 predicted gene 29326 6.4948 0.0000
10 ENSMUSG00000099197 Mir7034 microRNA 7034 6.4716 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000002797 Ggct Gamma-glutamylcyclotransferase -5.7507 0.0000
50997 ENSMUSG00000108233 Gm44084 predicted gene, 44084 -5.7498 0.0000
50996 ENSMUSG00000053746 Ptrh1 Probable peptidyl-tRNA hydrolase -5.7459 0.0000
50995 ENSMUSG00000020522 Mfap3 microfibril associated protein 3 -5.7403 0.0000
50994 ENSMUSG00000033068 Entpd6 Mus musculus ectonucleoside triphosphate diphosphohydrolase 6 (Entpd6), transcript variant 2, mRNA. -5.7387 0.0000
50993 ENSMUSG00000020327 Fgf22 Fibroblast growth factor 22 -5.7380 0.0000
50992 ENSMUSG00000024290 Rock1 Rho-associated protein kinase 1 -5.7376 0.0000
50991 ENSMUSG00000037095 Lrg1 leucine rich alpha-2-glycoprotein 1 -5.7374 0.0000
50990 ENSMUSG00000035407 Kank4 KN motif and ankyrin repeat domain-containing protein 4 -5.7330 0.0000
50989 ENSMUSG00000084526 n-R5s192 nuclear encoded rRNA 5S 192 -5.7303 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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