SHOGoiN Cell Methylome: GSM2026496

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026496


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M4Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000093052 Gm24816 predicted gene, 24816 8.1705 0.0000
2 ENSMUSG00000101102 Gm28609 predicted gene 28609 7.5774 0.0000
3 ENSMUSG00000051986 A530006G24Rik RIKEN cDNA A530006G24 gene 7.4936 0.0000
4 ENSMUSG00000081882 Gm14294 predicted gene 14294 7.4757 0.0000
5 ENSMUSG00000100837 1700063D05Rik RIKEN cDNA 1700063D05 gene 7.3500 0.0000
6 ENSMUSG00000029507 Pus1 pseudouridine synthase 1 7.3265 0.0000
7 ENSMUSG00000097152 Gm26515 predicted gene, 26515 7.3265 0.0000
8 ENSMUSG00000031821 Gins2 GINS complex subunit 2 (Psf2 homolog) 7.2972 0.0000
9 ENSMUSG00000097773 Gm10614 predicted gene 10614 7.2972 0.0000
10 ENSMUSG00000110239 Gm45620 predicted gene 45620 7.2961 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000086674 Zfp286os zinc finger protein 286, opposite strand -5.7341 0.0000
50853 ENSMUSG00000047342 Zfp286 zinc finger protein 286 -5.7341 0.0000
50852 ENSMUSG00000036480 Prss56 protease, serine 56 -5.7333 0.0000
50851 ENSMUSG00000086756 Gm14051 predicted gene 14051 -5.7288 0.0000
50850 ENSMUSG00000026308 Klhl30 kelch-like 30 -5.7282 0.0000
50849 ENSMUSG00000039748 Exo1 exonuclease 1 -5.7279 0.0000
50848 ENSMUSG00000020225 Tmbim4 transmembrane BAX inhibitor motif containing 4 -5.7279 0.0000
50847 ENSMUSG00000058709 Egln2 egl-9 family hypoxia-inducible factor 2 -5.7274 0.0000
50846 ENSMUSG00000019782 Rwdd1 RWD domain containing 1 -5.7215 0.0000
50845 ENSMUSG00000002833 Hdgfl2 HDGF like 2 -5.7212 0.1085

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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