SHOGoiN Cell Methylome: GSM2026496

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026496


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M4Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000093052 Gm24816 predicted gene, 24816 8.1705 0.0000
2 ENSMUSG00000101102 Gm28609 predicted gene 28609 7.5774 0.0000
3 ENSMUSG00000051986 A530006G24Rik RIKEN cDNA A530006G24 gene 7.4936 0.0000
4 ENSMUSG00000081882 Gm14294 predicted gene 14294 7.4757 0.0000
5 ENSMUSG00000100837 1700063D05Rik RIKEN cDNA 1700063D05 gene 7.3500 0.0000
6 ENSMUSG00000029507 Pus1 Mus musculus pseudouridine synthase 1 (Pus1), transcript variant 6, mRNA. 7.3265 0.0000
7 ENSMUSG00000097152 Gm26515 predicted gene, 26515 7.3265 0.0000
8 ENSMUSG00000031821 Gins2 DNA replication complex GINS protein PSF2 7.2972 0.0000
9 ENSMUSG00000097773 Gm10614 NA 7.2972 0.0000
10 ENSMUSG00000110239 Gm45620 predicted gene 45620 7.2961 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000025930 Msc Musculin -6.2784 0.0000
50997 ENSMUSG00000030654 Arl6ip1 ADP-ribosylation factor-like protein 6-interacting protein 1 -6.2761 0.0000
50996 ENSMUSG00000044597 Mycs Protein S-Myc -6.2617 0.0000
50995 ENSMUSG00000039037 St6galnac5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 -6.2582 0.0000
50994 ENSMUSG00000049511 Htr1b 5-hydroxytryptamine (serotonin) receptor 1B -6.2574 0.0000
50993 ENSMUSG00000111008 Gm31562 predicted gene, 31562 -6.2479 0.0000
50992 ENSMUSG00000098178 Gm42418 predicted gene, 42418 -6.2449 0.0000
50991 ENSMUSG00000022034 Esco2 N-acetyltransferase ESCO2 -6.2418 0.0000
50990 ENSMUSG00000085207 Gm11767 NA -6.2405 0.0000
50989 ENSMUSG00000038770 Kpna7 Importin subunit alpha-8 -6.2288 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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