SHOGoiN Cell Methylome: GSM2026498

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026498


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M6Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000032750 Gab3 GRB2-associated-binding protein 3 7.6865 0.0000
2 ENSMUSG00000031549 Ido2 Indoleamine 2,3-dioxygenase 2 7.6366 0.0000
3 ENSMUSG00000074595 Wfdc6a WAP four-disulfide core domain 6A 7.4978 0.0000
4 ENSMUSG00000081565 Rps12-ps5 ribosomal protein S12, pseudogene 5 7.4294 0.0000
5 ENSMUSG00000101886 Gm28324 predicted gene 28324 7.4005 0.0000
6 ENSMUSG00000046721 Rpl14-ps1 NA 7.3337 0.0000
7 ENSMUSG00000084466 Gm22960 predicted gene, 22960 7.3219 0.0000
8 ENSMUSG00000022546 Gpt glutamic pyruvic transaminase, soluble 7.2761 0.0000
9 ENSMUSG00000092116 Gm10320 NA 7.2595 0.0000
10 ENSMUSG00000045345 9530056K15Rik RIKEN cDNA 9530056K15 gene 7.1396 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000032383 Ppib peptidylprolyl isomerase B -6.3156 0.0000
50997 ENSMUSG00000032443 Zcwpw2 zinc finger, CW type with PWWP domain 2 -6.3126 0.0000
50996 ENSMUSG00000045573 Penk Proenkephalin-A Synenkephalin Met-enkephalin PENK(114-133) PENK(143-184) Met-enkephalin-Arg-Ser-Leu Leu-enkephalin PENK(238-259) Met-enkephalin-Arg-Phe -6.3072 0.0000
50995 ENSMUSG00000023243 Kcnk5 potassium two pore domain channel subfamily K member 5 -6.3038 0.0000
50994 ENSMUSG00000003360 Ddx23 DEAD-box helicase 23 -6.3038 0.0000
50993 ENSMUSG00000023050 Map3k12 Mus musculus mitogen-activated protein kinase kinase kinase 12 (Map3k12), transcript variant 3, mRNA. -6.3023 0.0000
50992 ENSMUSG00000039629 Strip2 Striatin-interacting proteins 2 -6.3008 0.0000
50991 ENSMUSG00000064264 Zfp428 zinc finger protein 428 -6.2964 0.0000
50990 ENSMUSG00000099118 Mir8092 microRNA 8092 -6.2964 0.0000
50989 ENSMUSG00000049164 Zfp518a zinc finger protein 518A -6.2964 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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