SHOGoiN Cell Methylome: GSM2026500

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026500


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M8Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000021716 Srek1ip1 Protein SREK1IP1 9.1972 0.0000
2 ENSMUSG00000096400 Gm6098 predicted gene 6098 8.7347 0.0000
3 ENSMUSG00000029343 Crybb1 Beta-crystallin B1 Beta-crystallin B1B 8.4979 0.0000
4 ENSMUSG00000066975 Cryba4 Beta-crystallin A4 8.4979 0.0000
5 ENSMUSG00000086769 Gm15587 predicted gene 15587 8.4798 0.0000
6 ENSMUSG00000093759 Scarletltr Scarletltr, erythroid developmental long intergenic non-protein coding transcript 8.4429 0.0000
7 ENSMUSG00000049410 Zfp683 zinc finger protein 683 8.4263 0.0000
8 ENSMUSG00000027006 Dnajc10 DnaJ homolog subfamily C member 10 8.2761 0.0000
9 ENSMUSG00000097026 Gm26786 predicted gene, 26786 8.2312 0.0000
10 ENSMUSG00000106694 Gm42894 predicted gene 42894 8.2288 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000075589 Gm11536 NA -7.3837 0.0000
50997 ENSMUSG00000111876 Gm18346 predicted gene, 18346 -7.3808 0.0000
50996 ENSMUSG00000039497 Dse Dermatan-sulfate epimerase -7.3808 0.0000
50995 ENSMUSG00000058006 Mdn1 midasin AAA ATPase 1 -7.3721 0.0000
50994 ENSMUSG00000048106 4632415L05Rik RIKEN cDNA 4632415L05 gene -7.3663 0.0000
50993 ENSMUSG00000018634 Crhr1 Corticotropin-releasing factor receptor 1 -7.3611 0.0000
50992 ENSMUSG00000020474 Polm polymerase (DNA directed), mu -7.3563 0.0000
50991 ENSMUSG00000097557 C130060C02Rik RIKEN cDNA C130060C02 gene -7.3558 0.0000
50990 ENSMUSG00000041491 Cep78 Centrosomal protein of 78 kDa -7.3558 0.0000
50989 ENSMUSG00000056941 Commd7 COMM domain-containing protein 7 -7.3420 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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