SHOGoiN Cell Methylome: GSM2026502

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026502


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M10Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110239 Gm45620 predicted gene 45620 9.1876 0.0000
2 ENSMUSG00000099764 Rps10-ps2 ribosomal protein S10, pseudogene 2 9.0875 0.0000
3 ENSMUSG00000102082 Gm28675 predicted gene 28675 8.8156 0.0000
4 ENSMUSG00000101102 Gm28609 predicted gene 28609 8.8089 0.0000
5 ENSMUSG00000077591 Gm26016 predicted gene, 26016 8.7266 0.0000
6 ENSMUSG00000056824 Zfp663 zinc finger protein 663 8.6882 0.0000
7 ENSMUSG00000076430 Hus1b Checkpoint protein HUS1B 8.6049 0.0000
8 ENSMUSG00000106739 Gm43499 predicted gene 43499 8.4769 0.0000
9 ENSMUSG00000039934 Gsap Gamma-secretase-activating protein Gamma-secretase-activating protein 16 kDa C-terminal form 8.3685 0.0000
10 ENSMUSG00000085049 Parvaos parvin, alpha, opposite strand 8.3405 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000016921 Srsf6 serine/arginine-rich splicing factor 6 -6.6610 0.0000
50997 ENSMUSG00000108563 Gm44686 predicted gene 44686 -6.6456 0.0000
50996 ENSMUSG00000087514 Gm16076 predicted gene 16076 -6.6402 0.0000
50995 ENSMUSG00000032330 Cox7a2 Cytochrome c oxidase subunit 7A2, mitochondrial -6.6329 0.0000
50994 ENSMUSG00000030244 Gys2 Glycogen -6.6319 0.0000
50993 ENSMUSG00000085973 Gm14742 predicted gene 14742 -6.6238 0.0000
50992 ENSMUSG00000039037 St6galnac5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 -6.6225 0.0000
50991 ENSMUSG00000032478 Nme6 Nucleoside diphosphate kinase 6 -6.6188 0.0000
50990 ENSMUSG00000056919 Cep162 Centrosomal protein of 162 kDa -6.6157 0.0000
50989 ENSMUSG00000046139 Patl1 1 -6.6129 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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