SHOGoiN Cell Methylome: GSM2026503

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026503


Profile download
3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M11Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110508 Gm8940 predicted gene 8940 8.5736 0.0000
2 ENSMUSG00000025380 Fscn2 Fascin-2 8.1280 0.0000
3 ENSMUSG00000110662 Gm45722 predicted gene 45722 8.0768 0.0000
4 ENSMUSG00000105518 Gm42674 NA 8.0661 0.0000
5 ENSMUSG00000101729 Gm17796 predicted gene, 17796 8.0444 0.0000
6 ENSMUSG00000000730 Dnmt3l DNA (cytosine-5)-methyltransferase 3-like 7.9944 0.0000
7 ENSMUSG00000030737 Slco2b1 solute carrier organic anion transporter family, member 2b1 7.9008 0.0000
8 ENSMUSG00000109559 Gm34280 predicted gene, 34280 7.9008 0.0000
9 ENSMUSG00000050276 Mrgprg Mas-related G-protein coupled receptor member G 7.8611 0.0000
10 ENSMUSG00000001020 S100a4 S100 calcium binding protein A4 7.8147 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000029314 Gpat3 glycerol-3-phosphate acyltransferase 3 -6.9747 0.0000
50997 ENSMUSG00000086682 Gm16023 predicted gene 16023 -6.9621 0.0000
50996 ENSMUSG00000093483 AA465934 expressed sequence AA465934 -6.9542 0.0000
50995 ENSMUSG00000083674 Zfp133-ps zinc finger protein 133, pseudogene -6.9542 0.0000
50994 ENSMUSG00000065715 Snord7 small nucleolar RNA, C/D box 7 -6.9542 0.0000
50993 ENSMUSG00000034998 Foxn2 Mus musculus forkhead box N2 (Foxn2), transcript variant 3, mRNA. -6.9542 0.0000
50992 ENSMUSG00000106106 NA -6.9363 0.0000
50991 ENSMUSG00000006435 Neurl1a E3 ubiquitin-protein ligase NEURL1 -6.9346 0.0000
50990 ENSMUSG00000112274 Gm47525 predicted gene, 47525 -6.9309 0.0000
50989 ENSMUSG00000053205 Styx serine/threonine/tyrosine interaction protein -6.9307 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...