SHOGoiN Cell Methylome: GSM2026505

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026505


Profile download
3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M13Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000065426 Mir134 microRNA 134 10.0091 0.0000
2 ENSMUSG00000065428 Mir382 microRNA 382 10.0091 0.0000
3 ENSMUSG00000065448 Mir154 microRNA 154 10.0091 0.0000
4 ENSMUSG00000070128 Mir485 microRNA 485 10.0091 0.0000
5 ENSMUSG00000070136 Mir496a microRNA 496a 10.0091 0.0000
6 ENSMUSG00000077925 Mir453 microRNA 453 10.0091 0.0000
7 ENSMUSG00000099236 Mir668 microRNA 668 10.0091 0.0000
8 ENSMUSG00000089530 Gm25163 predicted gene, 25163 9.6312 0.0000
9 ENSMUSG00000081341 Gm14891 predicted gene 14891 9.3032 0.0000
10 ENSMUSG00000026930 Gpsm1 Mus musculus G-protein signalling modulator 1 (AGS3-like, C. elegans) (Gpsm1), transcript variant 5, mRNA. 9.2071 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000015083 C8g Complement component C8 gamma chain -8.3556 0.0000
50997 ENSMUSG00000048076 Arf1 ADP-ribosylation factor 1 -8.3505 0.0000
50996 ENSMUSG00000097858 9530052C20Rik RIKEN cDNA 9530052C20 gene -8.3438 0.0000
50995 ENSMUSG00000020193 Zpbp zona pellucida binding protein -8.3412 0.0000
50994 ENSMUSG00000020191 Spata48 Spermatosis-associated protein 48 -8.3412 0.0000
50993 ENSMUSG00000001983 Taco1 Translational activator of cytochrome c oxidase 1 -8.3309 0.0000
50992 ENSMUSG00000062081 Gm6055 predicted gene 6055 -8.3240 0.0000
50991 ENSMUSG00000054889 Dsp Desmoplakin -8.3203 0.0000
50990 ENSMUSG00000086043 Gm12473 predicted gene 12473 -8.3138 0.0000
50989 ENSMUSG00000033931 Rbm34 RNA binding motif protein 34 -8.3129 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...