SHOGoiN Cell Methylome: GSM2026506

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026506


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M14Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084574 n-R5s198 nuclear encoded rRNA 5S 198 7.9248 0.0000
2 ENSMUSG00000087647 Gm15407 predicted gene 15407 7.6795 0.0000
3 ENSMUSG00000029204 Rhoh ras homolog family member H 7.6724 0.0000
4 ENSMUSG00000106681 Gm43004 predicted gene 43004 7.6724 0.0000
5 ENSMUSG00000106776 Gm42646 predicted gene 42646 7.6724 0.0000
6 ENSMUSG00000048981 Krt31 Keratin, type I cuticular Ha1 7.6511 0.0000
7 ENSMUSG00000087581 Gm11571 predicted gene 11571 7.6511 0.0000
8 ENSMUSG00000024440 Pcdh12 Protocadherin-12 7.5392 0.0000
9 ENSMUSG00000089530 Gm25163 predicted gene, 25163 7.4724 0.0000
10 ENSMUSG00000020383 Il13 Interleukin-13 7.3765 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50998 ENSMUSG00000021668 Polk polymerase (DNA directed), kappa -6.9069 0.0000
50997 ENSMUSG00000011171 Vipr2 vasoactive intestinal peptide receptor 2 -6.9064 0.0000
50996 ENSMUSG00000057777 Mab21l2 Protein mab-21-like 2 -6.9039 0.0000
50995 ENSMUSG00000045107 Saysd1 SAYSvFN domain-containing protein 1 -6.9034 0.0000
50994 ENSMUSG00000090113 Nhlrc4 NHL-repeat-containing protein 4 -6.9024 0.0000
50993 ENSMUSG00000025728 Pigq Phosphatidylinositol N-acetylglucosaminyltransferase subunit Q -6.9024 0.0000
50992 ENSMUSG00000097441 Gm26633 predicted gene, 26633 -6.8989 0.0000
50991 ENSMUSG00000029089 5730480H06Rik RIKEN cDNA 5730480H06 gene -6.8980 0.0000
50990 ENSMUSG00000005802 Slc30a4 Zinc transporter 4 -6.8959 0.0000
50989 ENSMUSG00000047904 Sstr2 Somatostatin receptor type 2 -6.8948 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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