SHOGoiN Cell Methylome: GSM2042047

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2042047


Profile download
7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M20Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000232217 FTLP8 ferritin light chain pseudogene 8 4.8074 0.0000
2 ENSG00000201586 RNU6-593P RNA, U6 small nuclear 593, pseudogene 4.6439 0.0000
3 ENSG00000232293 PAICSP7 phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 7 4.6439 0.0000
4 ENSG00000212485 RNU6-1197P RNA, U6 small nuclear 1197, pseudogene 4.5236 0.0000
5 ENSG00000224228 NA 4.5236 0.0000
6 ENSG00000228914 OR1H1P olfactory receptor family 1 subfamily H member 1 pseudogene 4.5236 0.0000
7 ENSG00000240992 RPS23P4 ribosomal protein S23 pseudogene 4 4.4799 0.0000
8 ENSG00000203942 C10orf62 chromosome 10 open reading frame 62 4.4594 0.0000
9 ENSG00000214391 TUBAP2 tubulin alpha pseudogene 2 4.4594 0.0000
10 ENSG00000249967 NA 4.4594 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000244422 RPL38P3 ribosomal protein L38 pseudogene 3 -3.7004 0.4080
63646 ENSG00000243916 NA -3.7004 0.4080
63645 ENSG00000243661 WBP1LP1 WW domain binding protein 1-like pseudogene 1 -3.7004 0.0781
63644 ENSG00000236664 NA -3.7004 1.0000
63643 ENSG00000236655 NA -3.7004 0.0095
63642 ENSG00000235827 TUBB8P9 tubulin beta 8 class VIII pseudogene 9 -3.7004 1.0000
63641 ENSG00000235774 NA -3.7004 0.0095
63640 ENSG00000232991 GACAT1 gastric cancer associated transcript 1 (non-protein coding) -3.7004 1.0000
63639 ENSG00000231743 NA -3.7004 1.0000
63638 ENSG00000228039 NA -3.7004 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...