SHOGoiN Cell Methylome: GSM2042048

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2042048


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5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M21Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000213786 NHP2P2 NHP2 ribonucleoprotein pseudogene 2 3.9897 0.0000
2 ENSG00000179709 NLRP8 NLR family pyrin domain containing 8 3.8074 0.0000
3 ENSG00000243385 NA 3.8074 0.0000
4 ENSG00000115816 CEBPZ CCAAT/enhancer binding protein zeta 3.7004 0.0000
5 ENSG00000249995 ECM1P2 extracellular matrix protein 1 pseudogene 2 3.7004 0.0000
6 ENSG00000251195 NA 3.7004 0.0000
7 ENSG00000267615 NA 3.7004 0.0000
8 ENSG00000264897 MIR3921 microRNA 3921 3.6773 0.0000
9 ENSG00000259180 NA 3.6716 0.0000
10 ENSG00000257005 NA 3.6699 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000251685 UGT2B27P UDP glucuronosyltransferase family 2 member B27, pseudogene -2.8074 1.0000
63646 ENSG00000251383 LINC02483 long intergenic non-protein coding RNA 2483 -2.8074 1.0000
63645 ENSG00000250697 NA -2.8074 1.0000
63644 ENSG00000250486 FAM218A family with sequence similarity 218 member A -2.8074 1.0000
63643 ENSG00000250376 NA -2.8074 1.0000
63642 ENSG00000249890 NA -2.8074 1.0000
63641 ENSG00000240641 RN7SL580P RNA, 7SL, cytoplasmic 580, pseudogene -2.8074 1.0000
63640 ENSG00000237874 NA -2.8074 1.0000
63639 ENSG00000237661 NA -2.8074 1.0000
63638 ENSG00000236858 NA -2.8074 0.1078

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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