SHOGoiN Cell Methylome: GSM2042050

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2042050


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9210600-755Sequence Read ArchiveSRP062328SRP062328_M23Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000248400 ST13P12 ST13, Hsp70 interacting protein pseudogene 12 5.2095 0.0000
2 ENSG00000253493 NA 5.0875 0.0000
3 ENSG00000231328 TPT1P7 tumor protein, translationally-controlled 1 pseudogene 7 4.9069 0.0000
4 ENSG00000232131 NCOA7-AS1 NCOA7 antisense RNA 1 4.8580 0.0000
5 ENSG00000248200 NA 4.7549 0.0000
6 ENSG00000254352 NA 4.7549 0.0000
7 ENSG00000202206 RNU6-169P RNA, U6 small nuclear 169, pseudogene 4.7004 0.0000
8 ENSG00000204993 NA 4.7004 0.0000
9 ENSG00000260322 NA 4.7004 0.0000
10 ENSG00000273629 U7 small nuclear RNA 4.7004 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000276428 NA -4.2692 0.0223
63818 ENSG00000281160 NA -4.2503 0.0000
63817 ENSG00000272948 NA -4.2479 0.0000
63816 ENSG00000260393 NA -4.2479 0.1198
63815 ENSG00000230576 OR6R1P olfactory receptor family 6 subfamily R member 1 pseudogene -4.2479 0.0336
63814 ENSG00000228735 NA -4.2479 0.0336
63813 ENSG00000225226 LINC01795 long intergenic non-protein coding RNA 1795 -4.2479 0.6217
63812 ENSG00000221040 Small nucleolar RNA U3 -4.2479 0.6217
63811 ENSG00000197591 OR11L1 olfactory receptor family 11 subfamily L member 1 -4.2479 0.0336
63810 ENSG00000166930 MS4A5 membrane spanning 4-domains A5 -4.2479 0.2631

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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