SHOGoiN Cell Methylome: GSM2042054

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2042054


Profile download
6020500-761Sequence Read ArchiveSRP062328SRP062328_M27Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliumBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000017483 SLC38A5 solute carrier family 38 member 5 4.3219 0.0000
2 ENSG00000200769 Y RNA 4.1699 0.0000
3 ENSG00000231259 NA 4.0875 0.0000
4 ENSG00000260161 MTCYBP28 mitochondrially encoded cytochrome b pseudogene 28 4.0875 0.0000
5 ENSG00000266931 NA 4.0875 0.0000
6 ENSG00000201298 RNU6-1164P RNA, U6 small nuclear 1164, pseudogene 4.0000 0.0000
7 ENSG00000250061 NA 4.0000 0.0000
8 ENSG00000207711 MIR525 microRNA 525 3.8074 0.0000
9 ENSG00000207771 MIR550A1 microRNA 550a-1 3.8074 0.0000
10 ENSG00000226339 RPS26P56 ribosomal protein S26 pseudogene 56 3.8074 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63819 ENSG00000279239 NA -3.3219 1.0000
63818 ENSG00000270094 NA -3.3219 0.3933
63817 ENSG00000269054 NA -3.3219 0.0009
63816 ENSG00000268230 NA -3.3219 0.0009
63815 ENSG00000267466 NA -3.3219 0.3933
63814 ENSG00000265763 ZNF488 zinc finger protein 488 -3.3219 1.0000
63813 ENSG00000263795 MIR5100 microRNA 5100 -3.3219 0.3933
63812 ENSG00000261543 NA -3.3219 1.0000
63811 ENSG00000261057 LINC00555 long intergenic non-protein coding RNA 555 -3.3219 0.3933
63810 ENSG00000259417 CTXND1 cortexin domain containing 1 -3.3219 0.1110

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...