SHOGoiN Cell Methylome: GSM2042055

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2042055


Profile download
5030203000000000000000-761Sequence Read ArchiveSRP062328SRP062328_M28Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000252914 RNU6-789P RNA, U6 small nuclear 789, pseudogene 3.9069 0.0000
2 ENSG00000212167 RNU6-763P RNA, U6 small nuclear 763, pseudogene 3.5850 0.0000
3 ENSG00000224540 NA 3.5850 0.0000
4 ENSG00000236610 SOCS5P1 suppressor of cytokine signaling 5 pseudogene 1 3.5850 0.0000
5 ENSG00000239149 SNORA59A small nucleolar RNA, H/ACA box 59A 3.5850 0.0000
6 ENSG00000242094 FOXP1-IT1 FOXP1 intronic transcript 1 3.4594 0.0000
7 ENSG00000257852 NA 3.4594 0.0000
8 ENSG00000259727 NA 3.4594 0.0000
9 ENSG00000267583 NA 3.4594 0.0000
10 ENSG00000277855 NA 3.4594 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000164284 GRPEL2 GrpE like 2, mitochondrial -2.8074 1.0000
63646 ENSG00000163263 C1orf189 chromosome 1 open reading frame 189 -2.8074 1.0000
63645 ENSG00000162344 FGF19 fibroblast growth factor 19 -2.8074 0.0008
63644 ENSG00000138039 LHCGR luteinizing hormone/choriogonadotropin receptor -2.8074 0.0707
63643 ENSG00000136630 HLX H2.0 like homeobox -2.8074 0.0043
63642 ENSG00000135114 OASL 2'-5'-oligoadenylate synthetase like -2.8074 0.6160
63641 ENSG00000128692 EIF2S2P4 eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 4 -2.8074 1.0000
63640 ENSG00000125703 ATG4C autophagy related 4C cysteine peptidase -2.8074 1.0000
63639 ENSG00000116741 RGS2 regulator of G protein signaling 2 -2.8074 1.0000
63638 ENSG00000111788 NA -2.8074 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...