SHOGoiN Cell Methylome: GSM2042057

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2042057


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5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M30Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000278636 NA 4.5236 0.0000
2 ENSG00000274367 NA 4.4594 0.0000
3 ENSG00000201573 NA 4.3219 0.0000
4 ENSG00000226388 ELL2P4 elongation factor for RNA polymerase II 2 pseudogene 4 4.3219 0.0000
5 ENSG00000243546 RN7SL108P RNA, 7SL, cytoplasmic 108, pseudogene 4.3219 0.0000
6 ENSG00000273675 NA 4.3219 0.0000
7 ENSG00000160284 SPATC1L spermatogenesis and centriole associated 1 like 4.2479 0.0000
8 ENSG00000222561 RNU6-1025P RNA, U6 small nuclear 1025, pseudogene 4.2479 0.0000
9 ENSG00000228404 NA 4.2479 0.0000
10 ENSG00000254335 CDH12P1 cadherin 12 pseudogene 1 4.2479 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63647 ENSG00000226181 NA -3.4170 0.0024
63646 ENSG00000283464 NA -3.4040 0.0000
63645 ENSG00000243378 NA -3.4031 0.0000
63644 ENSG00000261270 NA -3.4004 0.0001
63643 ENSG00000261114 NA -3.4004 0.0001
63642 ENSG00000227268 KLLN killin, p53 regulated DNA replication inhibitor -3.4004 0.0001
63641 ENSG00000240063 NA -3.4000 0.0056
63640 ENSG00000278034 MIR6731 microRNA 6731 -3.3990 0.0040
63639 ENSG00000187166 H1FNT H1 histone family member N, testis specific -3.3916 0.0450
63638 ENSG00000279535 NA -3.3900 0.1104

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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