SHOGoiN Cell Transcriptome: Project ID SRP035326


No.Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleProject DescriptionProject Submission DateOrganization NameStable Contact InformationReference Submission StatusReference AuthorsReference TitleReference Pubmed IdAssay TypeAssay FactorSample IdSHOGoiN Cell IdSource Cell TypeSource OrganismRace Or StrainAge Or StageSource Tissue Or OrganSource Cell KaryotypeCell LineageOrganism Genetic InformationHealth StatusSource ProviderAssay TechnologyAssay Detection InstrumentationAssay Detection Instrument VendorAssessed MaterialSource Cell FormatSource Cell Preparation MethodSource Cell Identidication MethodSource Cell TreatmentData IdData TypeData Processing MethodData Processing Software And VersionData Normalization MethodData Normalization Software Name And VersionData Analytical Software And VersionReference Sequence SourceGenome Annotation Ref
1

GSM1305777

3160000-009Sequence Read ArchiveSRP035326SRP035326_T1Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057773160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+SRR1106612Sequencemm9
2

GSM1305778

3160000-009Sequence Read ArchiveSRP035326SRP035326_T2Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057783160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+SRR1106613Sequencemm9
3

GSM1305779

3160000-009Sequence Read ArchiveSRP035326SRP035326_T3Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057793160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+SRR1106614Sequencemm9
4

GSM1305780

3160000-009Sequence Read ArchiveSRP035326SRP035326_T4Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057803160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+SRR1106615Sequencemm9
5

GSM1305781

3160000-009Sequence Read ArchiveSRP035326SRP035326_T5Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057813160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+SRR1106616Sequencemm9
6

GSM1305782

3160000-009Sequence Read ArchiveSRP035326SRP035326_T6Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057823160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+ CD8+ CD86+SRR1106617Sequencemm9
7

GSM1305783

3160000-009Sequence Read ArchiveSRP035326SRP035326_T7Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057833160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+ CD8-neg CD317+SRR1106618Sequencemm9
8

GSM1305784

3160000-009Sequence Read ArchiveSRP035326SRP035326_T8Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057843160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+ CD8-neg CD4+ ESAM+SRR1106619Sequencemm9
9

GSM1305785

3160000-009Sequence Read ArchiveSRP035326SRP035326_T9Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057853160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+ CD8+ CD86-negSRR1106620Sequencemm9
10

GSM1305786

3160000-009Sequence Read ArchiveSRP035326SRP035326_T10Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057863160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+ CD8+ CD317+SRR1106621Sequencemm9
11

GSM1305787

3160000-009Sequence Read ArchiveSRP035326SRP035326_T11Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057873160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD19+ TCRb-neg B220+ or CD19+ TCRb-neg B220-negSRR1106622Sequencemm9
12

GSM1305788

3160000-009Sequence Read ArchiveSRP035326SRP035326_T12Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057883160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedNK1.1+ TCRb-neg CD19-neg or Gr1+ CD11b+ TCRb-neg CD19-neg NK1.1-negPBS injection into organismSRR1106623Sequencemm9
13

GSM1305789

3160000-009Sequence Read ArchiveSRP035326SRP035326_T13Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057893160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+PBS injection into organismSRR1106624Sequencemm9
14

GSM1305790

3160000-009Sequence Read ArchiveSRP035326SRP035326_T14Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057903160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+PBS injection into organismSRR1106625Sequencemm9
15

GSM1305791

3160000-009Sequence Read ArchiveSRP035326SRP035326_T15Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057913160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+1 _g LPS injection into organismSRR1106626Sequencemm9
16

GSM1305792

3160000-009Sequence Read ArchiveSRP035326SRP035326_T16Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057923160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+1 _g LPS injection into organismSRR1106627Sequencemm9
17

GSM1305793

3160000-009Sequence Read ArchiveSRP035326SRP035326_T17Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057933160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+PBS injection into organismSRR1106628Sequencemm9
18

GSM1305794

3160000-009Sequence Read ArchiveSRP035326SRP035326_T18Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057943160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+PBS injection into organismSRR1106629Sequencemm9
19

GSM1305795

3160000-009Sequence Read ArchiveSRP035326SRP035326_T19Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057953160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+1 _g LPS injection into organismSRR1106630Sequencemm9
20

GSM1305796

3160000-009Sequence Read ArchiveSRP035326SRP035326_T20Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057963160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+1 _g LPS injection into organismSRR1106631Sequencemm9
21

GSM1305797

3160000-009Sequence Read ArchiveSRP035326SRP035326_T21Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057973160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+PBS injection into organismSRR1106632Sequencemm9
22

GSM1305798

3160000-009Sequence Read ArchiveSRP035326SRP035326_T22Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057983160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+1 _g LPS injection into organismSRR1106633Sequencemm9
23

GSM1305799

3160000-009Sequence Read ArchiveSRP035326SRP035326_T23Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13057993160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+1 _g LPS injection into organismSRR1106634Sequencemm9
24

GSM1305800

3160000-009Sequence Read ArchiveSRP035326SRP035326_T24Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13058003160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+1 _g LPS injection into organismSRR1106635Sequencemm9
25

GSM1305801

3160000-009Sequence Read ArchiveSRP035326SRP035326_T25Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13058013160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+PBS injection into organismSRR1106636Sequencemm9
26

GSM1305802

3160000-009Sequence Read ArchiveSRP035326SRP035326_T26Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13058023160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+PBS injection into organismSRR1106637Sequencemm9
27

GSM1305803

3160000-009Sequence Read ArchiveSRP035326SRP035326_T27Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13058033160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+1 _g LPS injection into organismSRR1106638Sequencemm9
28

GSM1305804

3160000-009Sequence Read ArchiveSRP035326SRP035326_T28Massively parallel single-cell RNA-Seq for dissecting cell type and cell state compositionshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5400614-Feb-14Weizmann Institute of ScienceIdo Amit, ido.amit@weizmann.ac.ilPublishedJaitin DA, Kenigsberg E, Keren-Shaul H, Elefant N et al.Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.24531970Transcriptome3160000-009GSM13058043160000-009Dendritic cellMouseC57BL/612-15 week oldSpleenRNA-seqHiSeq 2000IlluminapolyA RNASingle cell, sortedCD11c+1 _g LPS injection into organismSRR1106639Sequencemm9