SHOGoiN Cell Transcriptome: Project ID SRP059549


No.Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleProject DescriptionProject Submission DateOrganization NameStable Contact InformationReference Submission StatusReference AuthorsReference TitleReference Pubmed IdAssay TypeAssay FactorSample IdSHOGoiN Cell IdSource Cell TypeSource OrganismRace Or StrainAge Or StageSource Tissue Or OrganSource Cell KaryotypeCell LineageOrganism Genetic InformationHealth StatusSource ProviderAssay TechnologyAssay Detection InstrumentationAssay Detection Instrument VendorAssessed MaterialSource Cell FormatSource Cell Preparation MethodSource Cell Identidication MethodSource Cell TreatmentData IdData TypeData Processing MethodData Processing Software And VersionData Normalization MethodData Normalization Software Name And VersionData Analytical Software And VersionReference Sequence SourceGenome Annotation Ref
1

GSM1713184

8000102-734Sequence Read ArchiveSRP059549SRP059549_T1Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131848000102-734Mesenchymal Stem Cell (MSC)MouseC57BL, male 3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064513SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
2

GSM1713185

8000102-734Sequence Read ArchiveSRP059549SRP059549_T2Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131858000102-734Mesenchymal Stem Cell (MSC)MouseC58BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064514SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
3

GSM1713186

8000102-734Sequence Read ArchiveSRP059549SRP059549_T3Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131868000102-734Mesenchymal Stem Cell (MSC)MouseC59BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064515SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
4

GSM1713187

8000102-734Sequence Read ArchiveSRP059549SRP059549_T4Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131878000102-734Mesenchymal Stem Cell (MSC)MouseC60BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064516SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
5

GSM1713188

8000102-734Sequence Read ArchiveSRP059549SRP059549_T5Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131888000102-734Mesenchymal Stem Cell (MSC)MouseC61BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064517SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
6

GSM1713189

8000102-734Sequence Read ArchiveSRP059549SRP059549_T6Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131898000102-734Mesenchymal Stem Cell (MSC)MouseC62BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064518SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
7

GSM1713190

8000102-734Sequence Read ArchiveSRP059549SRP059549_T7Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131908000102-734Mesenchymal Stem Cell (MSC)MouseC63BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064519SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
8

GSM1713191

8000102-734Sequence Read ArchiveSRP059549SRP059549_T8Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131918000102-734Mesenchymal Stem Cell (MSC)MouseC64BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064520SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
9

GSM1713192

8000102-734Sequence Read ArchiveSRP059549SRP059549_T9Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131928000102-734Mesenchymal Stem Cell (MSC)MouseC65BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064521SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
10

GSM1713193

8000102-734Sequence Read ArchiveSRP059549SRP059549_T10Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131938000102-734Mesenchymal Stem Cell (MSC)MouseC66BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064522SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
11

GSM1713194

8000102-734Sequence Read ArchiveSRP059549SRP059549_T11Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131948000102-734Mesenchymal Stem Cell (MSC)MouseC67BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064523SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
12

GSM1713195

8000102-734Sequence Read ArchiveSRP059549SRP059549_T12Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131958000102-734Mesenchymal Stem Cell (MSC)MouseC68BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064524SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
13

GSM1713196

8000102-734Sequence Read ArchiveSRP059549SRP059549_T13Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131968000102-734Mesenchymal Stem Cell (MSC)MouseC69BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064525SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
14

GSM1713197

8000102-734Sequence Read ArchiveSRP059549SRP059549_T14Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131978000102-734Mesenchymal Stem Cell (MSC)MouseC70BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064526SequenceTophat2.0.12FPKMCufflinks2.2.1mm10
15

GSM1713198

8000102-734Sequence Read ArchiveSRP059549SRP059549_T15Single-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusionhttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6992616-Jun-15University of Minnesota-Twin CitiesBrenda M Ogle, ogle@umn.eduPublishedFreeman BT, Jung PJ, Ogle BMSingle-cell RNA-seq reveals activation of unique gene groups as a consequence of stem cell-parenchymal cell fusion.26997336Transcriptome8000102-734GSM17131988000102-734Mesenchymal Stem Cell (MSC)MouseC71BL, male3 moBone marrowGeorgia Reagents University, Augusta, GA RNA-SeqMiSeqIlluminaTotal RNASingle cell, cultured (passages: 6-11)Fluidigm C1 chipSRR2064527SequenceTophat2.0.12FPKMCufflinks2.2.1mm10