SHOGoiN Cell Transcriptome: Project ID SRP062177


No.Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleProject DescriptionProject Submission DateOrganization NameStable Contact InformationReference Submission StatusReference AuthorsReference TitleReference Pubmed IdAssay TypeAssay FactorSample IdSHOGoiN Cell IdSource Cell TypeSource OrganismRace Or StrainAge Or StageSource Tissue Or OrganSource Cell KaryotypeCell LineageOrganism Genetic InformationHealth StatusSource ProviderAssay TechnologyAssay Detection InstrumentationAssay Detection Instrument VendorAssessed MaterialSource Cell FormatSource Cell Preparation MethodSource Cell Identidication MethodSource Cell TreatmentData IdData TypeData Processing MethodData Processing Software And VersionData Normalization MethodData Normalization Software Name And VersionData Analytical Software And VersionReference Sequence SourceGenome Annotation Ref
1

GSM1846949

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T1Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469497020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149785SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
2

GSM1846950

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T2Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469507020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149786SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
3

GSM1846951

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T3Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469517020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149787SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
4

GSM1846952

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T4Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469527020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149788SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
5

GSM1846953

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T5Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469537020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149789SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
6

GSM1846954

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T6Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469547020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149790SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
7

GSM1846955

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T7Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469557020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149791SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
8

GSM1846956

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T8Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469567020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149792SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
9

GSM1846957

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T9Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469577020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149793SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
10

GSM1846958

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T10Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469587020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149794SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
11

GSM1846959

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T11Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469597020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149795SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
12

GSM1846960

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T12Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469607020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149796SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
13

GSM1846961

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T13Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469617020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149797SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
14

GSM1846962

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T14Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469627020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149798SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
15

GSM1846963

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T15Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469637020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149799SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
16

GSM1846964

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T16Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469647020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149800SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
17

GSM1846965

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T17Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469657020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149801SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
18

GSM1846966

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T18Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469667020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149802SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
19

GSM1846967

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T19Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469677020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149803SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
20

GSM1846968

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T20Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469687020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149804SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
21

GSM1846969

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T21Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469697020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149805SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
22

GSM1846970

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T22Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469707020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149806SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
23

GSM1846971

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T23Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469717020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149807SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
24

GSM1846972

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T24Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469727020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149808SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
25

GSM1846973

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T25Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469737020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149809SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
26

GSM1846974

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T26Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469747020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149810SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
27

GSM1846975

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T27Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469757020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149811SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
28

GSM1846976

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T28Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469767020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149812SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
29

GSM1846977

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T29Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469777020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149813SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
30

GSM1846978

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T30Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469787020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149814SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
31

GSM1846979

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T31Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469797020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149815SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
32

GSM1846980

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T32Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469807020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149816SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
33

GSM1846981

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T33Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469817020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking) SRR2149817SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
34

GSM1846982

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T34Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469827020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149818SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
35

GSM1846983

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T35Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469837020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149819SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
36

GSM1846984

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T36Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469847020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149820SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
37

GSM1846985

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T37Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469857020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedFixed_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149821SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
38

GSM1846986

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T38Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469867020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149822SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
39

GSM1846987

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T39Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469877020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149823SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
40

GSM1846988

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T40Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469887020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149824SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
41

GSM1846989

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T41Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469897020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149825SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
42

GSM1846990

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T42Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469907020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_RLT (RNA from live or fixed cells was harvested using the Qiagen microRNeasy Kit)SRR2149826SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
43

GSM1846991

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T43Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469917020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149827SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
44

GSM1846992

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T44Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469927020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149828SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19
45

GSM1846993

7020001000000000000000-715Sequence Read ArchiveSRP062177SRP062177_T45Fixed single-cell transcriptomic characterization of human radial glial diversityhttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE718587-Aug-15Allen Institute for Brain ScienceZizhen Yao, zizheny@alleninstitute.orgPublishedThomsen ER, Mich JK, Yao Z, Hodge RD et al.Fixed single-cell transcriptomic characterization of human radial glial diversity.26524239Transcriptome7020001000000000000000-715GSM18469937020001000000000000000-715Embryonic stem cell (Inner cell mass)HumanH1Early embryonic tissueWiCell, Madison WIRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, culturedLive_PLRC (a modified fixed-cell method with protease lysis and reverse cross-linking)SRR2149829SequenceBowtie, RSEMTPM (transcripts per milllion reads), principal-component and clustering analysishg19