SHOGoiN Cell Transcriptome: Project ID SRP068586


No.Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleProject DescriptionProject Submission DateOrganization NameStable Contact InformationReference Submission StatusReference AuthorsReference TitleReference Pubmed IdAssay TypeAssay FactorSample IdSHOGoiN Cell IdSource Cell TypeSource OrganismRace Or StrainAge Or StageSource Tissue Or OrganSource Cell KaryotypeCell LineageOrganism Genetic InformationHealth StatusSource ProviderAssay TechnologyAssay Detection InstrumentationAssay Detection Instrument VendorAssessed MaterialSource Cell FormatSource Cell Preparation MethodSource Cell Identidication MethodSource Cell TreatmentData IdData TypeData Processing MethodData Processing Software And VersionData Normalization MethodData Normalization Software Name And VersionData Analytical Software And VersionReference Sequence SourceGenome Annotation Ref
1

GSM2041916

8000102Sequence Read ArchiveSRP068586SRP068586_T1Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419168000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106539Sequencemm10
2

GSM2041917

8000102Sequence Read ArchiveSRP068586SRP068586_T2Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419178000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106540Sequencemm10
3

GSM2041918

8000102Sequence Read ArchiveSRP068586SRP068586_T3Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419188000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106541Sequencemm10
4

GSM2041919

8000102Sequence Read ArchiveSRP068586SRP068586_T4Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419198000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106542Sequencemm10
5

GSM2041920

8000102Sequence Read ArchiveSRP068586SRP068586_T5Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419208000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106543Sequencemm10
6

GSM2041921

8000102Sequence Read ArchiveSRP068586SRP068586_T6Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419218000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106544Sequencemm10
7

GSM2041922

8000102Sequence Read ArchiveSRP068586SRP068586_T7Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419228000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106545Sequencemm10
8

GSM2041923

8000102Sequence Read ArchiveSRP068586SRP068586_T8Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419238000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106546Sequencemm10
9

GSM2041924

8000102Sequence Read ArchiveSRP068586SRP068586_T9Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419248000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106547Sequencemm10
10

GSM2041925

8000102Sequence Read ArchiveSRP068586SRP068586_T10Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419258000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106548Sequencemm10
11

GSM2041926

8000102Sequence Read ArchiveSRP068586SRP068586_T11Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419268000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106549Sequencemm10
12

GSM2041927

8000102Sequence Read ArchiveSRP068586SRP068586_T12Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419278000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106550Sequencemm10
13

GSM2041928

8000102Sequence Read ArchiveSRP068586SRP068586_T13Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419288000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106551Sequencemm10
14

GSM2041929

8000102Sequence Read ArchiveSRP068586SRP068586_T14Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419298000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106552Sequencemm10
15

GSM2041930

8000102Sequence Read ArchiveSRP068586SRP068586_T15Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419308000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106553Sequencemm10
16

GSM2041931

8000102Sequence Read ArchiveSRP068586SRP068586_T16Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419318000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106554Sequencemm10
17

GSM2041932

8000102Sequence Read ArchiveSRP068586SRP068586_T17Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419328000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106555Sequencemm10
18

GSM2041933

8000102Sequence Read ArchiveSRP068586SRP068586_T18Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102GSM20419338000102Bone marrow cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, micro-dissectedSRR3106556Sequencemm10
19

GSM2077292

8000102-724Sequence Read ArchiveSRP068586SRP068586_T19Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102-724GSM20772928000102-724Hematopoietic stem cellMouseC57BL/623-57 woBone marrowRNA-SeqHiSeq 2500IlluminaTotal RNASingle cell, sortedSRR3198319Sequencemm10
20

GSM2077293

8000102-724Sequence Read ArchiveSRP068586SRP068586_T20Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102-724GSM20772938000102-724Hematopoietic stem cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, sortedSRR3198320Sequencemm10
21

GSM2077294

8000102-724Sequence Read ArchiveSRP068586SRP068586_T21Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102-724GSM20772948000102-724Hematopoietic stem cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, sortedSRR3198321Sequencemm10
22

GSM2077295

8000102-724Sequence Read ArchiveSRP068586SRP068586_T22Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102-724GSM20772958000102-724Hematopoietic stem cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, sortedSRR3198322Sequencemm10
23

GSM2077296

8000102-724Sequence Read ArchiveSRP068586SRP068586_T23Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellshttp://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE7698319-Jan-16Hubrecht InstituteJean-Charles Boisset, j.boisset@hubrecht.euPublishedGr_n D, Muraro MJ, Boisset JC, Wiebrands K et al.De Novo Prediction of Stem Cell Identity using Single-Cell Transcriptome Data.27345837Transcriptome8000102-724GSM20772968000102-724Hematopoietic stem cellMouseC57BL/623-57 woBone marrowRNA-SeqNextSeq 500IlluminaTotal RNASingle cell, sortedSRR3198323Sequencemm10