SHOGoiN Cell Transcriptome: GSM1080195

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080195


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5030206000000000000000-761Sequence Read ArchiveSRP018525SRP018525_T1Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeSecondary oocyte (Ovarian follicle)MouseGenitaliaRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000018238 Gdf9 growth differentiation factor 9 92.3932
2 ENSMUSG00000042279 H1foo H1 histone family, member O, oocyte-specific 87.2392
3 ENSMUSG00000021395 Spin1 spindlin 1 59.4870
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 45.3598
5 ENSMUSG00000032191 Bcl2l10 Bcl2-like 10 36.1904
6 ENSMUSG00000031538 Plat plasminogen activator, tissue 35.5933
7 ENSMUSG00000074369 Obox2 oocyte specific homeobox 2 34.9329
8 ENSMUSG00000041995 Zbed3 zinc finger, BED type containing 3 26.4987
9 ENSMUSG00000026435 Slc45a3 solute carrier family 45, member 3 25.5455
10 ENSMUSG00000079042 Apela apelin receptor early endogenous ligand 25.4607

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108260 Gm3793 predicted gene 3793 -0.1170
46623 ENSMUSG00000108258 Gm43913 predicted gene, 43913 -0.1170
46622 ENSMUSG00000108257 Gm44251 predicted gene, 44251 -0.1170
46621 ENSMUSG00000108256 Gm43923 predicted gene, 43923 -0.1170
46620 ENSMUSG00000108255 Gm16499 predicted gene 16499 -0.1170
46619 ENSMUSG00000108254 Gm43908 predicted gene, 43908 -0.1170
46618 ENSMUSG00000108253 Olfr1542-ps1 olfactory receptor 1542, pseudogene 1 -0.1170
46617 ENSMUSG00000108252 Gm44059 predicted gene, 44059 -0.1170
46616 ENSMUSG00000108251 Gm44112 predicted gene, 44112 -0.1170
46615 ENSMUSG00000108250 Tas2r111-ps2 taste receptor, type 2, member 111, pseudogene 2 -0.1170

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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