SHOGoiN Cell Transcriptome: GSM1080196

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080196


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5030206000000000000000-761Sequence Read ArchiveSRP018525SRP018525_T2Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptomeSecondary oocyte (Ovarian follicle)MouseGenitaliaRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000018238 Gdf9 growth differentiation factor 9 84.9026
2 ENSMUSG00000042279 H1foo H1 histone family, member O, oocyte-specific 83.3085
3 ENSMUSG00000021395 Spin1 spindlin 1 55.2802
4 ENSMUSG00000032191 Bcl2l10 Bcl2-like 10 49.5447
5 ENSMUSG00000038925 E330034G19Rik RIKEN cDNA E330034G19 gene 49.0417
6 ENSMUSG00000041359 Tcl1 T cell lymphoma breakpoint 1 46.5989
7 ENSMUSG00000074369 Obox2 oocyte specific homeobox 2 43.1832
8 ENSMUSG00000031538 Plat plasminogen activator, tissue 37.2736
9 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 32.8597
10 ENSMUSG00000031353 Rbbp7 retinoblastoma binding protein 7, chromatin remodeling factor 32.4882

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0962
54523 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0962
54522 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0962
54521 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0962
54520 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0962
54519 ENSMUSG00000117323 novel transcript -0.0962
54518 ENSMUSG00000117322 novel transcript, antisense to Zfp213 -0.0962
54517 ENSMUSG00000117321 ribosomal protein S27 (Rps27) pseudogene -0.0962
54516 ENSMUSG00000117320 ribosomal protein S6 (Rps6) pseudogene -0.0962
54515 ENSMUSG00000117319 exocrine gland-secreting peptide pseudogene -0.0962

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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