SHOGoiN Cell Transcriptome: GSM1080200

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080200


Profile download
7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T3Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 103.1597
2 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 99.7924
3 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 90.3308
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 61.4593
5 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 60.1453
6 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 55.0236
7 ENSMUSG00000100131 Gm28439 predicted gene 28439 29.0530
8 ENSMUSG00000100862 Gm10925 predicted gene 10925 28.0218
9 ENSMUSG00000102070 Gm28661 predicted gene 28661 27.5598
10 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 27.3422

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108153 Gm44402 predicted gene, 44402 -0.0730
46623 ENSMUSG00000108151 Gm33201 predicted gene, 33201 -0.0730
46622 ENSMUSG00000108150 Gm44470 predicted gene, 44470 -0.0730
46621 ENSMUSG00000108149 Olfr439-ps1 olfactory receptor 439, pseudogene 1 -0.0730
46620 ENSMUSG00000108148 Gm44020 predicted gene, 44020 -0.0730
46619 ENSMUSG00000108147 4930443G03Rik RIKEN cDNA 4930443G03 gene -0.0730
46618 ENSMUSG00000108146 Gm43889 predicted gene, 43889 -0.0730
46617 ENSMUSG00000108145 Gm38811 predicted gene, 38811 -0.0730
46616 ENSMUSG00000108143 Gm44414 predicted gene, 44414 -0.0730
46615 ENSMUSG00000108141 Gm44079 predicted gene, 44079 -0.0730

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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