SHOGoiN Cell Transcriptome: GSM1080201

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080201


Profile download
7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T4Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 101.4897
2 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 80.1008
3 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 77.4347
4 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 60.7765
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 60.1722
6 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 57.1070
7 ENSMUSG00000100862 Gm10925 predicted gene 10925 31.9014
8 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 26.0780
9 ENSMUSG00000064357 mt-Atp6 mitochondrially encoded ATP synthase 6 25.8761
10 ENSMUSG00000100131 Gm28439 predicted gene 28439 25.6638

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108141 Gm44079 predicted gene, 44079 -0.1244
46623 ENSMUSG00000108139 Gm44055 predicted gene, 44055 -0.1244
46622 ENSMUSG00000108138 Gm18485 predicted gene, 18485 -0.1244
46621 ENSMUSG00000108135 Gm8035 predicted gene 8035 -0.1244
46620 ENSMUSG00000108134 Gm9560 predicted gene 9560 -0.1244
46618 ENSMUSG00000108131 Gm44099 predicted gene, 44099 -0.1244
46617 ENSMUSG00000108130 Gm30781 predicted gene, 30781 -0.1244
46616 ENSMUSG00000108129 4930417O13Rik RIKEN cDNA 4930417O13 gene -0.1244
46615 ENSMUSG00000108128 4922502N22Rik RIKEN cDNA 4922502N22 gene -0.1244
10 ENSMUSG00000100131 Gm28439 predicted gene 28439 25.6638

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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