SHOGoiN Cell Transcriptome: GSM1080201

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080201


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7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T4Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 107.9233
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 95.6645
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 75.0966
4 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 71.5626
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 67.8315
6 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 63.1840
7 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 33.6107
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 16.0946
9 ENSMUSG00000057113 Npm1 nucleophosmin 1 14.5129
10 ENSMUSG00000021477 Ctsl cathepsin L 14.3468

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117331 exocrine gland-secreting peptide pseudogene -0.1166
54523 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.1166
54522 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.1166
54521 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.1166
54520 ENSMUSG00000117327 NA -0.1166
54519 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.1166
54518 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.1166
54517 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.1166
54516 ENSMUSG00000117323 novel transcript -0.1166
54515 ENSMUSG00000117322 novel transcript, antisense to Zfp213 -0.1166

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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