SHOGoiN Cell Transcriptome: GSM1080202

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1080202


Profile download
7010000000000000000000-770Sequence Read ArchiveSRP018525SRP018525_T5Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell RNA-SequencingTranscriptome2-cell embryo cell (2-cell embryo)MouseEarly embryonic tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 121.8790
2 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 109.9416
3 ENSMUSG00000064345 mt-Nd2 mitochondrially encoded NADH dehydrogenase 2 91.2772
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 78.6322
5 ENSMUSG00000064363 mt-Nd4 mitochondrially encoded NADH dehydrogenase 4 67.9101
6 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 56.0546
7 ENSMUSG00000064367 mt-Nd5 mitochondrially encoded NADH dehydrogenase 5 53.3557
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 10.0530
9 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 8.0451
10 ENSMUSG00000005610 Eif4g2 eukaryotic translation initiation factor 4, gamma 2 6.3035

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0558
54523 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0558
54522 ENSMUSG00000117327 NA -0.0558
54521 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0558
54520 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0558
54519 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0558
54518 ENSMUSG00000117323 novel transcript -0.0558
54517 ENSMUSG00000117321 ribosomal protein S27 (Rps27) pseudogene -0.0558
54516 ENSMUSG00000117320 ribosomal protein S6 (Rps6) pseudogene -0.0558
54515 ENSMUSG00000117319 exocrine gland-secreting peptide pseudogene -0.0558

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...